RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 BTNL10A8MVZ5 291 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 FSCN2O14926 492 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 PJA2O43164 708 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 ABLIM3O94929 683 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 ARHGEF15O94989 841 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 ATF2P15336 505 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 RPL17P18621 184 aaKnown RBP16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 GRIK1P39086 918 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 GABRB2P47870 512 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 MAP3K7CLP57077 242 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 ZNF268Q14587 947 aaPredicted RBP16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 RSPO2Q6UXX9 243 aaPredicted RBP16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 RNF19BQ6ZMZ0 732 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 TMEM110Q86TL2 294 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 ZDHHC17Q8IUH5 632 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 CCAR2Q8N163 923 aaKnown RBP16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 MRPL43Q8N983 215 aaKnown RBP16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 ZNF653Q96CK0 615 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 C8orf48Q96LL4 319 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 C11orf70Q9BRQ4 267 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 AVENQ9NQS1 362 aaPredicted RBP16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 SCINQ9Y6U3 715 aa16.71■□□□□ 0.27
TRAFD1-203ENST00000547063 A0A0A6YYK5 440 aaPredicted RBP16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 GRM6O15303 877 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 TEX28O15482 410 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 FBXO21O94952 628 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 ABCB4P21439 1286 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 CYP2F1P24903 491 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 ELF1P32519 619 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 RPL34P49207 117 aaKnown RBP16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 ERVFC1P60507 584 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 ADCY1Q08828 1119 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 IFI16Q16666 785 aaKnown RBP16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 CCDC142Q17RM4 750 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 LRIT3Q3SXY7 679 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 PMF1Q6P1K2 205 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 PIGZQ86VD9 579 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 RHOT2Q8IXI1 618 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 ATAD1Q8NBU5 361 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 AUTS2Q8WXX7 1259 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 PGLYRP2Q96PD5 576 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 CPXM1Q96SM3 734 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 SMOQ99835 787 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 MRPL47Q9HD33 250 aaKnown RBP16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 CYTH4Q9UIA0 394 aa16.7■□□□□ 0.26
TRAFD1-203ENST00000547063 C2orf71A6NGG8 1288 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 ADAM12O43184 909 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 SART1O43290 800 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 CNPP09543 421 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 HAPLN1P10915 354 aaPredicted RBP16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 KLRC2P26717 231 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 SCNN1AP37088 669 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 PTPROQ16827 1216 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 PTPN20Q4JDL3 420 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 PLPP4Q5VZY2 271 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 ELMSAN1Q6PJG2 1045 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 RTL10Q7L3V2 364 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 SCN4BQ8IWT1 228 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 SIX6OS1Q8N1H7 587 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 ARNTL2Q8WYA1 636 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 RFFLQ8WZ73 363 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 KLHL5Q96PQ7 755 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 PARVAQ9NVD7 372 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 EHD2Q9NZN4 543 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 CNOT8Q9UFF9 292 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 DPP7Q9UHL4 492 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 LCMT1Q9UIC8 334 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 NCANO14594 1321 aa16.69■□□□□ 0.26
TRAFD1-203ENST00000547063 TMEM265A0A087WTH1 108 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 E5RJQ4 531 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 F8VP50 259 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 CYP1A2P05177 515 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 RGS7P49802 495 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 PTP4A2Q12974 167 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 DUSP4Q13115 394 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 PLD1Q13393 1074 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 TCEAL1Q15170 157 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 MGAT5BQ3V5L5 792 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 CCDC149Q6ZUS6 474 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 TCEAL8Q8IYN2 117 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 C3orf20Q8ND61 904 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 ZMIZ2Q8NF64 920 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 SPATA17Q96L03 361 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 KCNK16Q96T55 309 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 SEPT5Q99719 369 aaPredicted RBP16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 RHOBTB2Q9BYZ6 727 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 COMMD8Q9NX08 183 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 TRMT1Q9NXH9 659 aaKnown RBP16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 CTTNBP2NLQ9P2B4 639 aa16.68■□□□□ 0.26
TRAFD1-203ENST00000547063 TULP2O00295 520 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms