RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 USP27XA6NNY8 438 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 HHLA1C9JL84 531 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 E5RJQ4 531 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 LPXNO60711 386 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 FTLP02792 175 aaPredicted RBP17.98■□□□□ 0.47
CADM1-220ENST00000546000 SETSIPP0DME0 302 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 NSFP46459 744 aaKnown RBP17.98■□□□□ 0.47
CADM1-220ENST00000546000 GALCP54803 685 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 RAB33AQ14088 237 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 DDR2Q16832 855 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 LRIT3Q3SXY7 679 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 MGAT5BQ3V5L5 792 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 PIGZQ86VD9 579 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 SLC35F5Q8WV83 523 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 THAP2Q9H0W7 228 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 DMAP1Q9NPF5 467 aaPredicted RBP17.98■□□□□ 0.47
CADM1-220ENST00000546000 ST7Q9NRC1 585 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 STK39Q9UEW8 545 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 MYH10P35580 1976 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 CDH23Q9H251 3354 aa17.98■□□□□ 0.47
CADM1-220ENST00000546000 XPO1O14980 1071 aaKnown RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 PER2O15055 1255 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 TGM5O43548 720 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 RTN2O75298 545 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 ABL1P00519 1130 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 HAPLN1P10915 354 aaPredicted RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 ATF6P18850 670 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 MAGEA1P43355 309 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 RBM10P98175 930 aaKnown RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 SPA17Q15506 151 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 CFAP221Q4G0U5 840 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 GPR153Q6NV75 609 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 MCOLN2Q8IZK6 566 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 SPPL2BQ8TCT7 592 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 CLEC4CQ8WTT0 213 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 NDRG1Q92597 394 aaKnown RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 ZNF653Q96CK0 615 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 LRCH3Q96II8 777 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 PIWIL1Q96J94 861 aaKnown RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 PPP1R13BQ96KQ4 1090 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 OXCT2Q9BYC2 517 aaPredicted RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 ISCUQ9H1K1 167 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 TTYH1Q9H313 450 aaPredicted RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 ZNF576Q9H609 170 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 CSNK1G1Q9HCP0 422 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 TRMT1Q9NXH9 659 aaKnown RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 AFF4Q9UHB7 1163 aaKnown RBP17.97■□□□□ 0.47
CADM1-220ENST00000546000 PPP2R2CQ9Y2T4 447 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 YIPF1Q9Y548 306 aa17.97■□□□□ 0.47
CADM1-220ENST00000546000 MYO7AQ13402 2215 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 CLASP2O75122 1294 aaKnown RBP17.96■□□□□ 0.47
CADM1-220ENST00000546000 ABLIM3O94929 683 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 LCP1P13796 627 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 MMP8P22894 467 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 RRM1P23921 792 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 KLRC2P26717 231 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 GRIK1P39086 918 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 PLA2G4AP47712 749 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 CREMQ03060 361 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 ADIGQ0VDE8 80 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 IFRD2Q12894 506 aaPredicted RBP17.96■□□□□ 0.47
CADM1-220ENST00000546000 FAM183BPQ6ZVS7 135 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 KIAA1328Q86T90 577 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 RBM23Q86U06 439 aaKnown RBP17.96■□□□□ 0.47
CADM1-220ENST00000546000 PHF13Q86YI8 300 aaPredicted RBP17.96■□□□□ 0.47
CADM1-220ENST00000546000 GPR65Q8IYL9 337 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 FEZF2Q8TBJ5 459 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 GIPC2Q8TF65 315 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 FUBP3Q96I24 572 aaKnown RBP eCLIP17.96■□□□□ 0.47
CADM1-220ENST00000546000 EMILIN2Q9BXX0 1053 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 LACRTQ9GZZ8 138 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 MIS12Q9H081 205 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 PRDM12Q9H4Q4 367 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 CYP4F11Q9HBI6 524 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 ABCB6Q9NP58 842 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 NGRNQ9NPE2 291 aaKnown RBP17.96■□□□□ 0.47
CADM1-220ENST00000546000 ADAM22Q9P0K1 906 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 MYO1AQ9UBC5 1043 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 IRAK3Q9Y616 596 aa17.96■□□□□ 0.47
CADM1-220ENST00000546000 GOLGA8SH3BPF8 625 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 IPO7O95373 1038 aaKnown RBP17.95■□□□□ 0.46
CADM1-220ENST00000546000 ADH1AP07327 375 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 H2AFZP0C0S5 128 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 GZMAP12544 262 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 EPCAMP16422 314 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 GTF2F1P35269 517 aaKnown RBP eCLIP17.95■□□□□ 0.46
CADM1-220ENST00000546000 MAGEA11P43364 429 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 VAV2P52735 878 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 MTMR3Q13615 1198 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 H2AFVQ71UI9 128 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 ERICH1Q86X53 443 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 XYLT1Q86Y38 959 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 SCAMP5Q8TAC9 235 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 ZNF461Q8TAF7 563 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 SLC4A5Q9BY07 1137 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 SYNCQ9H7C4 482 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 FBXW11Q9UKB1 542 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 ZKSCAN5Q9Y2L8 839 aa17.95■□□□□ 0.46
CADM1-220ENST00000546000 TRANK1O15050 2925 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms