RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 USP4Q13107 963 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 ZNF667Q5HYK9 610 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 TTC16Q8NEE8 873 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 SECISBP2LQ93073 1101 aaKnown RBP24.22■■□□□ 1.47
CHD4-214ENST00000545942 TRPM5Q9NZQ8 1165 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 DENND4CQ5VZ89 1909 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 OBSL1O75147 1896 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 KIF26AQ9ULI4 1882 aaPredicted RBP24.22■■□□□ 1.47
CHD4-214ENST00000545942 TRDMT1O14717 391 aaKnown RBP24.21■■□□□ 1.47
CHD4-214ENST00000545942 RHOBTB3O94955 611 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 PFKLP17858 780 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 HDCP19113 662 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 PPP3CCP48454 512 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 GRSF1Q12849 480 aaKnown RBP eCLIP24.21■■□□□ 1.47
CHD4-214ENST00000545942 TMEM196Q5HYL7 178 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 CPA6Q8N4T0 437 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 TMC2Q8TDI7 906 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 OSCP1Q8WVF1 389 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 CHFRQ96EP1 664 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 ZNF518BQ9C0D4 1074 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 SMYD3Q9H7B4 428 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 DUS2Q9NX74 493 aaKnown RBP24.21■■□□□ 1.47
CHD4-214ENST00000545942 ARHGAP26Q9UNA1 814 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 TRAF3IP3Q9Y228 551 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 FRMD4BQ9Y2L6 1034 aa24.21■■□□□ 1.47
CHD4-214ENST00000545942 A0A1W2PQ27 194 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 A0A1W2PQ64 194 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 A0A1W2PQD8 194 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 CALUO43852 315 aaPredicted RBP24.2■■□□□ 1.46
CHD4-214ENST00000545942 VNN1O95497 513 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 PRR29P0C7W0 189 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 CDH8P55286 799 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 DLG4P78352 724 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 CEP135Q66GS9 1140 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 SH3RF2Q8TEC5 729 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 B3GNT5Q9BYG0 378 aa24.2■■□□□ 1.46
CHD4-214ENST00000545942 OTOGLQ3ZCN5 2332 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 K7ESF4 209 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 TCF3P15923 654 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 IFNAR2P48551 515 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 CACNA2D1P54289 1103 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 DPYDQ12882 1025 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 SGSM1Q2NKQ1 1148 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 ZACNQ401N2 412 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 FSTL4Q6MZW2 842 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 SCARA5Q6ZMJ2 495 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 KRBA2Q6ZNG9 492 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 ATP2A3Q93084 1043 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 EXOC4Q96A65 974 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 TNIP3Q96KP6 325 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 ECT2Q9H8V3 914 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 TMEM30AQ9NV96 361 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 WNT6Q9Y6F9 365 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 ATP8B3O60423 1300 aa24.19■■□□□ 1.46
CHD4-214ENST00000545942 ZNF840PA6NDX5 716 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 CLDN5O00501 218 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 IKBKBO14920 756 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 P4HA1P13674 534 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 RAP1GAPP47736 663 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 C2orf42Q9NWW7 574 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 RAB23Q9ULC3 237 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 GPR179Q6PRD1 2367 aa24.18■■□□□ 1.46
CHD4-214ENST00000545942 CHURC1-FNTBB4DL54 471 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 MAPK13O15264 365 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 GJA4P35212 333 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 FNTBP49356 437 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 DMWDQ09019 674 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 TAF10Q12962 218 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 NFIL3Q16649 462 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 EML3Q32P44 896 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 SV2AQ7L0J3 742 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 LONP2Q86WA8 852 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 GPR161Q8N6U8 529 aaKnown RBP24.17■■□□□ 1.46
CHD4-214ENST00000545942 TAF4BQ92750 862 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 ELMO3Q96BJ8 720 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 SLITRK1Q96PX8 696 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 GOLPH3LQ9H4A5 285 aa24.17■■□□□ 1.46
CHD4-214ENST00000545942 ZNF202O95125 648 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 DRD1P21728 446 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 NR2F2P24468 414 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 HOXA6P31267 233 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 CNR2P34972 360 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 NUP93Q8N1F7 819 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 P2RY13Q9BPV8 354 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 MED10Q9BTT4 135 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 SDCBP2Q9H190 292 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 GMEB2Q9UKD1 530 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 MAPK8IP1Q9UQF2 711 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 ZNF292O60281 2723 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 PTPRDP23468 1912 aa24.16■■□□□ 1.46
CHD4-214ENST00000545942 ATG13O75143 517 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 RTN3O95197 1032 aaPredicted RBP24.15■■□□□ 1.46
CHD4-214ENST00000545942 ABL1P00519 1130 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 YWHAQP27348 245 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 GALK1P51570 392 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 VAMP7P51809 220 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 SLC7A9P82251 487 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 ZXDBP98169 803 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 FOXK2Q01167 660 aa24.15■■□□□ 1.46
CHD4-214ENST00000545942 NR1H3Q13133 447 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms