RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SYCP2LQ5T4T6 812 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 SPATA18Q8TC71 538 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 SPPL2BQ8TCT7 592 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 KIFAP3Q92845 792 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 MTMR9Q96QG7 549 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 HAPLN2Q9GZV7 340 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 AK5Q9Y6K8 562 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 LACTBL1A8MY62 500 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 ERVH48-1M5A8F1 160 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 SLC28A2O43868 658 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 NDUFS2O75306 463 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 CYP11A1P05108 521 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 CSH1P0DML2 217 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 CSH2P0DML3 217 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 HDCP19113 662 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 CYP3A5P20815 502 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 TNFSF9P41273 254 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 GRIA2P42262 883 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 EVCP57679 992 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 ATP2C1P98194 919 aaPredicted RBP16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 TLE3Q04726 772 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 CCDC173Q0VFZ6 552 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 BLOC1S2Q6QNY1 142 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 FBXL16Q8N461 479 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 C2orf15Q8WU43 125 aaKnown RBP16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 NXPE2Q96DL1 559 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 MIR1-1HGQ9H1L0 117 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 GMIPQ9P107 970 aa16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 UBQLN1Q9UMX0 589 aaKnown RBP16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 MYO18AQ92614 2054 aaKnown RBP16.6■□□□□ 0.25
CLSTN3-216ENST00000545663 KNL1Q8NG31 2342 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 A0A1B0GTW7 788 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 E9PAM4 449 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 LEFTY2O00292 366 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 CPLX1O14810 134 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 FLRT2O43155 660 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 TNFSF14O43557 240 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 ZNF883P0CG24 379 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 HOXB2P14652 356 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 MATKP42679 507 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 RESTQ13127 1097 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 ECM1Q16610 540 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 COLEC12Q5KU26 742 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 WDR45BQ5MNZ6 344 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 DAW1Q8N136 415 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 PHTF2Q8N3S3 785 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 CD248Q9HCU0 757 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 ARHGAP26Q9UNA1 814 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 PCDHB5Q9Y5E4 795 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 TSC2P49815 1807 aa16.59■□□□□ 0.25
CLSTN3-216ENST00000545663 TBC1D3BA6NDS4 549 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 ZNF217O75362 1048 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 NOL4O94818 638 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 CYP2F1P24903 491 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 STK3Q13188 491 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 KCNB1Q14721 858 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 WSCD1Q658N2 575 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 ZNF513Q8N8E2 541 aaPredicted RBP16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 NAT16Q8N8M0 369 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 DNASE2BQ8WZ79 361 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 MYRFLQ96LU7 910 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 ACOX2Q99424 681 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 BHMT2Q9H2M3 363 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 PLEKHA5Q9HAU0 1116 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 ANK1P16157 1881 aa16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 UTP20O75691 2785 aaKnown RBP16.58■□□□□ 0.24
CLSTN3-216ENST00000545663 CYB561D2O14569 222 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 KCNK3O14649 394 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 TRIM66O15016 1216 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 TRIM24O15164 1050 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 SLC16A4O15374 487 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 NEMFO60524 1076 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 TOM1L1O75674 476 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 CER1O95813 267 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 C6P13671 934 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 JUPP14923 745 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 TCF3P15923 654 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 C9orf57Q5W0N0 161 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 SPACA3Q8IXA5 215 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 THEM5Q8N1Q8 247 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 BAP1Q92560 729 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 FOXJ1Q92949 421 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 TNFRSF25Q93038 417 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 TRMT2BQ96GJ1 504 aaKnown RBP16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 KMT5AQ9NQR1 393 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 PCDHGB2Q9Y5G2 931 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 MYOFQ9NZM1 2061 aa16.57■□□□□ 0.24
CLSTN3-216ENST00000545663 A0A1B0GVT2 93 aa16.56■□□□□ 0.24
CLSTN3-216ENST00000545663 SFI1A8K8P3 1242 aa16.56■□□□□ 0.24
CLSTN3-216ENST00000545663 MEI4A8MW99 385 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms