RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CREB3L3Q68CJ9 461 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 SLCO4C1Q6ZQN7 724 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 RALYLQ86SE5 291 aaKnown RBP7.47□□□□□ -1.21
LDHA-223ENST00000545215 RNF168Q8IYW5 571 aaPredicted RBP7.47□□□□□ -1.21
LDHA-223ENST00000545215 ZNF248Q8NDW4 579 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 ESR2Q92731 530 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 CDC6Q99741 560 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 TMEM47Q9BQJ4 181 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 PDCD2LQ9BRP1 358 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 TM6SF1Q9BZW5 370 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 JPH1Q9HDC5 661 aaPredicted RBP7.47□□□□□ -1.21
LDHA-223ENST00000545215 FBXW11Q9UKB1 542 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 SLC12A7Q9Y666 1083 aa7.47□□□□□ -1.21
LDHA-223ENST00000545215 VWA8A3KMH1 1905 aa7.46□□□□□ -1.21
LDHA-223ENST00000545215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 TNFRSF10CO14798 259 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 PPP1R12AO14974 1030 aaPredicted RBP7.46□□□□□ -1.22
LDHA-223ENST00000545215 SLC27A2O14975 620 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 CHADO15335 359 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 DIAPH2O60879 1101 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 ALBP02768 609 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 CYP21A2P08686 494 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 NME1P15531 152 aaKnown RBP7.46□□□□□ -1.22
LDHA-223ENST00000545215 MARK3P27448 753 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 NOVP48745 357 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 CRYBB1P53674 252 aaPredicted RBP7.46□□□□□ -1.22
LDHA-223ENST00000545215 SART3Q15020 963 aaKnown RBP7.46□□□□□ -1.22
LDHA-223ENST00000545215 SLC5A9Q2M3M2 681 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 TBC1D25Q3MII6 688 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 NOMO2Q5JPE7 1267 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 CDCP2Q5VXM1 449 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 UNC5AQ6ZN44 842 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 ARMCX6Q7L4S7 300 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 SYT13Q7L8C5 426 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 RABEPKQ7Z6M1 372 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 GPR65Q8IYL9 337 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 GOLGA6L1Q8N7Z2 621 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 NCOA7Q8NI08 942 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 SETD7Q8WTS6 366 aaKnown RBP7.46□□□□□ -1.22
LDHA-223ENST00000545215 WDR89Q96FK6 387 aaPredicted RBP7.46□□□□□ -1.22
LDHA-223ENST00000545215 C22orf23Q9BZE7 217 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 PRDM16Q9HAZ2 1276 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.46□□□□□ -1.222e-11■■□□□ 12.5
LDHA-223ENST00000545215 CHST7Q9NS84 486 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 PFDN2Q9UHV9 154 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 FAN1Q9Y2M0 1017 aa7.46□□□□□ -1.22
LDHA-223ENST00000545215 PHLPP2Q6ZVD8 1323 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 ATXN2Q99700 1313 aaKnown RBP7.45□□□□□ -1.22
LDHA-223ENST00000545215 VPS37CA5D8V6 355 aaPredicted RBP7.45□□□□□ -1.22
LDHA-223ENST00000545215 NRP1O14786 923 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 BRINP1O60477 761 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 PDHBP11177 359 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 CEBPBP17676 345 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 PLCG1P19174 1290 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 TCF7P36402 384 aaPredicted RBP7.45□□□□□ -1.22
LDHA-223ENST00000545215 VIPR2P41587 438 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 AFMP43652 599 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 SSRP1Q08945 709 aaKnown RBP7.45□□□□□ -1.22
LDHA-223ENST00000545215 MYO1EQ12965 1108 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 NCAPHQ15003 741 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 PGM5Q15124 567 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 LIN9Q5TKA1 542 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 C1QL3Q5VWW1 255 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 LYSMD4Q5XG99 296 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 NLRC3Q7RTR2 1065 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 IQCA1Q86XH1 822 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 TBC1D10CQ8IV04 446 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 TMTC2Q8N394 836 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 SMARCD2Q92925 531 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 FNBP1Q96RU3 617 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 TMEM209Q96SK2 561 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 SEMA3CQ99985 751 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 CLSTN3Q9BQT9 956 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 TPSD1Q9BZJ3 242 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 TRPV4Q9HBA0 871 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 PCDHA1Q9Y5I3 950 aa7.45□□□□□ -1.22
LDHA-223ENST00000545215 MED13LQ71F56 2210 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 SVILO95425 2214 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 ERICH2A1L162 156 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 WIPF3A6NGB9 483 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 E7EWF7 191 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 K7ENP7 123 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 DDHD2O94830 711 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 RHOP08100 348 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 EPXP11678 715 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 JUPP14923 745 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 LIG1P18858 919 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 MCM5P33992 734 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 SRSF11Q05519 484 aaKnown RBP7.44□□□□□ -1.22
LDHA-223ENST00000545215 ZNF543Q08ER8 600 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 DMC1Q14565 340 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 PLCB4Q15147 1175 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 UVSSAQ2YD98 709 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 LINC00303Q3SY05 128 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 ZC3H12AQ5D1E8 599 aaKnown RBP7.44□□□□□ -1.22
LDHA-223ENST00000545215 TMEM196Q5HYL7 178 aa7.44□□□□□ -1.22
LDHA-223ENST00000545215 AXDND1Q5T1B0 1012 aaPredicted RBP7.44□□□□□ -1.22
LDHA-223ENST00000545215 GPATCH4Q5T3I0 446 aaKnown RBP7.44□□□□□ -1.22
LDHA-223ENST00000545215 INO80CQ6PI98 192 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms