RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 CXorf38Q8TB03 319 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 SLC35C1Q96A29 364 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 ATXN3LQ9H3M9 355 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 OBP2AQ9NY56 170 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 GTSE1Q9NYZ3 720 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 MAGEC2Q9UBF1 373 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-206ENST00000544964 SIX4Q9UIU6 781 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 ATG2BQ96BY7 2078 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 CACNA1BQ00975 2339 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 HELZP42694 1942 aaKnown RBP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 EML5Q05BV3 1969 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 SMTNL1A8MU46 457 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 BECN2A8MW95 431 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 SPECC1L-ADORA2AF8WAN1 911 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 FGF19O95750 216 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 CST3P01034 146 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 HAPLN1P10915 354 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 WEE1P30291 646 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 AP3M2P53677 418 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 RBP5P82980 135 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 ENPEPQ07075 957 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 TNK2Q07912 1038 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 DMWDQ09019 674 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 PUM1Q14671 1186 aaKnown RBP eCLIP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 MGAT5BQ3V5L5 792 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 ZACNQ401N2 412 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 YAF2Q8IY57 180 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 STKLD1Q8NE28 680 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 SPPL2BQ8TCT7 592 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 ELMO3Q96BJ8 720 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 HSD3B7Q9H2F3 369 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 C8orf33Q9H7E9 229 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 PARD6AQ9NPB6 346 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 C2orf42Q9NWW7 574 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
ACTN1-206ENST00000544964 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.31□□□□□ -0.28
ACTN1-206ENST00000544964 KPNA7A9QM74 516 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 K7ESF4 209 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 STX10O60499 249 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 PAPSS2O95340 614 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 VNN1O95497 513 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CAVIN2O95810 425 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CDC25CP30307 473 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 GTF2H1P32780 548 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TUFMP49411 452 aaKnown RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 GPR15P49685 360 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 MXI1P50539 228 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 KPNA1P52294 538 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 MYL6P60660 151 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 KCNH2Q12809 1159 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TRPC3Q13507 836 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CCINQ13939 588 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 VEPH1Q14D04 833 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 RSPO4Q2I0M5 234 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 SV2CQ496J9 727 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CBWD6Q4V339 395 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TCP11X2Q5H9J9 407 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CBWD3Q5JTY5 395 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CBWD5Q5RIA9 395 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 KRT39Q6A163 491 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 C1orf228Q6PIY5 440 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 RALGPS2Q86X27 583 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 PDCL2Q8N4E4 241 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 SPEM1Q8N4L4 309 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TTC8Q8TAM2 541 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 FAM200AQ8TCP9 573 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 BPIFB1Q8TDL5 484 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TAS1R2Q8TE23 839 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 CHFRQ96EP1 664 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 ZNF560Q96MR9 790 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 PKMYT1Q99640 499 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TUBGCP2Q9BSJ2 902 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 SLC46A2Q9BY10 475 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TMEM8AQ9HCN3 771 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 L1RE1Q9UN81 338 aa13.3□□□□□ -0.28
ACTN1-206ENST00000544964 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
ACTN1-206ENST00000544964 TADA3O75528 432 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 CLSTN1O94985 981 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 HLA-DRAP01903 254 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 AFPP02771 609 aaKnown RBP13.29□□□□□ -0.28
ACTN1-206ENST00000544964 ATP1A3P13637 1013 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-206ENST00000544964 ZNF18P17022 549 aa13.29□□□□□ -0.28
ACTN1-206ENST00000544964 CDK11BP21127 795 aaKnown RBP13.29□□□□□ -0.28
ACTN1-206ENST00000544964 EEF1GP26641 437 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms