RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ENGP17813 658 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 HDCP19113 662 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 ABCD1P33897 745 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 MCM6Q14566 821 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 FAM171BQ6P995 826 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 LPCAT2Q7L5N7 544 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 ADGRG2Q8IZP9 1017 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 TMEM86AQ8N2M4 240 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 IL17RCQ8NAC3 791 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 ZSWIM2Q8NEG5 633 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 SPATA18Q8TC71 538 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 AK8Q96MA6 479 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 STRA6Q9BX79 667 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
USP28-212ENST00000544750 SLC32A1Q9H598 525 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 GDAP2Q9NXN4 497 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 PILRBQ9UKJ0 227 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 SPAARA0A1B0GVQ0 90 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 LEFTY2O00292 366 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 ADAM23O75077 832 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 OLFM2O95897 454 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 ITGB3P05106 788 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 PFKLP17858 780 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 POLR2BP30876 1174 aaKnown RBP13.75□□□□□ -0.21
USP28-212ENST00000544750 EIF2DP41214 584 aaKnown RBP13.75□□□□□ -0.21
USP28-212ENST00000544750 MAGEA11P43364 429 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 KIR2DL1P43626 348 aaPredicted RBP13.75□□□□□ -0.21
USP28-212ENST00000544750 SLC6A11P48066 632 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 MYL7Q01449 175 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 DHX8Q14562 1220 aaKnown RBP13.75□□□□□ -0.21
USP28-212ENST00000544750 KCNB1Q14721 858 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 HSF5Q4G112 596 aaPredicted RBP13.75□□□□□ -0.21
USP28-212ENST00000544750 ZNF720Q7Z2F6 126 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 LIMS2Q7Z4I7 341 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 TMEFF1Q8IYR6 380 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 ALLCQ8N6M5 410 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 FSIP1Q8NA03 581 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 TXNDC5Q8NBS9 432 aaKnown RBP13.75□□□□□ -0.21
USP28-212ENST00000544750 TTC16Q8NEE8 873 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 WHAMMQ8TF30 809 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 AGAP1Q9UPQ3 857 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 ACACAQ13085 2346 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 IGSF10Q6WRI0 2623 aa13.75□□□□□ -0.21
USP28-212ENST00000544750 HUS1O60921 280 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 ALDH1A2O94788 518 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 HOXD12P35452 270 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 MAPK8P45983 427 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 USP46P62068 366 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 FAM193AP78312 1265 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 SIM1P81133 766 aaPredicted RBP13.74□□□□□ -0.21
USP28-212ENST00000544750 SLC7A9P82251 487 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 DHCR24Q15392 516 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 EMC10Q5UCC4 262 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 C12orf40Q86WS4 652 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 PROSER1Q86XN7 944 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 PHTF2Q8N3S3 785 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 TOP6BLQ8N6T0 577 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 LRRC52Q8N7C0 313 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 RAD54LQ92698 747 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 FAM84AQ96KN4 292 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 SPATA17Q96L03 361 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 CEP295NLQ96MC4 621 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 TTLL2Q9BWV7 592 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 RNF38Q9H0F5 515 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 SIX4Q9UIU6 781 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 MYH10P35580 1976 aa13.74□□□□□ -0.21
USP28-212ENST00000544750 ATXN2Q99700 1313 aaKnown RBP13.73□□□□□ -0.21
USP28-212ENST00000544750 H0Y626 953 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 ATP2C2O75185 946 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 KAT7O95251 611 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 TRIM16O95361 564 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 KLF8O95600 359 aaPredicted RBP13.73□□□□□ -0.21
USP28-212ENST00000544750 PLCG1P19174 1290 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 ITPKAP23677 461 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 GJB2P29033 226 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 TIE1P35590 1138 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 DPP6P42658 865 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 LHX1P48742 406 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 PDE6CP51160 858 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 TFAMQ00059 246 aaKnown RBP13.73□□□□□ -0.21
USP28-212ENST00000544750 KCNA1Q09470 495 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 CUL4AQ13619 759 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 POSTNQ15063 836 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 SOWAHAQ2M3V2 549 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 LYSMD4Q5XG99 296 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 RHBDF2Q6PJF5 856 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
USP28-212ENST00000544750 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 SPATA2LQ8IUW3 424 aaPredicted RBP13.73□□□□□ -0.21
USP28-212ENST00000544750 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 POMGNT1Q8WZA1 660 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 HVCN1Q96D96 273 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 SPACA7Q96KW9 195 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 PNKPQ96T60 521 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms