RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CASC1Q6TDU7 716 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 NFXL1Q6ZNB6 911 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 GK5Q6ZS86 529 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 ANKS3Q6ZW76 656 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 ACAD11Q709F0 780 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 C12orf40Q86WS4 652 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 CHCHD4Q8N4Q1 142 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 SRBD1Q8N5C6 995 aaKnown RBP4.51□□□□□ -1.69
SNHG1-220ENST00000544550 RBBP8NLQ8NC74 664 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-220ENST00000544550 CCDC26Q8TAB7 109 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 ZNF461Q8TAF7 563 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 ZSCAN18Q8TBC5 510 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-220ENST00000544550 ELMO3Q96BJ8 720 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 PGBD1Q96JS3 809 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 ZNF512Q96ME7 567 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-220ENST00000544550 TMEM209Q96SK2 561 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 RIT2Q99578 217 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 CSRNP2Q9H175 543 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 GSX1Q9H4S2 264 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-220ENST00000544550 SLITRK6Q9H5Y7 841 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 CYP4F12Q9HCS2 524 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 OBP2AQ9NY56 170 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 CRIM1Q9NZV1 1036 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 DKK4Q9UBT3 224 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 EBF1Q9UH73 591 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 TPCN1Q9ULQ1 816 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 MAFFQ9ULX9 164 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 HIF3AQ9Y2N7 669 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 BACE2Q9Y5Z0 518 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 CDY1Q9Y6F8 540 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 SPEGQ15772 3267 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 FRYLO94915 3013 aa4.51□□□□□ -1.69
SNHG1-220ENST00000544550 DOCK5Q9H7D0 1870 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 A0A087WV48 116 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 SPAARA0A1B0GVQ0 90 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 F8W735 103 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TMEM189-UBE2V1I3L0A0 370 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 ARHGAP6O43182 974 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 GAS7O60861 476 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 OPHN1O60890 802 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 PLEKHA8P1O95397 391 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TIAF1O95411 115 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 THP07101 528 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 SRGAP2CP0DJJ0 459 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 ATF2P15336 505 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 HOXD12P35452 270 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 ABCG1P45844 678 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 IRX4P78413 519 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 SOX4Q06945 474 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-220ENST00000544550 SEMA3BQ13214 749 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TFDP1Q14186 410 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 MAPK6Q16659 721 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 PRR16Q569H4 304 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TRIM61Q5EBN2 209 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TMEM201Q5SNT2 666 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 ANKRD45Q5TZF3 282 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 LMBRD2Q68DH5 695 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-220ENST00000544550 WWC2Q6AWC2 1192 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 SHISA2Q6UWI4 295 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 CCNI2Q6ZMN8 369 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-220ENST00000544550 CCDC81Q6ZN84 652 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TMTC3Q6ZXV5 915 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 RABEPKQ7Z6M1 372 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 PIP4P1Q86T03 277 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 KSR1Q8IVT5 923 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TCEAL8Q8IYN2 117 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 RNF149Q8NC42 400 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 GSTCDQ8NEC7 633 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 OR6P1Q8NGX9 317 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 IGDCC4Q8TDY8 1250 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 CPLX3Q8WVH0 158 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TCP11Q8WWU5 503 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 ADAMTS14Q8WXS8 1223 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 FERD3LQ96RJ6 166 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 CEP89Q96ST8 783 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 KIF2CQ99661 725 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 TEKT3Q9BXF9 490 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 EIF2AQ9BY44 585 aaKnown RBP4.5□□□□□ -1.69
SNHG1-220ENST00000544550 CYP4F11Q9HBI6 524 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 ASAH2Q9NR71 780 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 RBM28Q9NW13 759 aaKnown RBP4.5□□□□□ -1.69
SNHG1-220ENST00000544550 C2orf42Q9NWW7 574 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 THG1LQ9NWX6 298 aaKnown RBP4.5□□□□□ -1.69
SNHG1-220ENST00000544550 MIOSQ9NXC5 875 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 ADAM30Q9UKF2 790 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 RAXQ9Y2V3 346 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 HES2Q9Y543 173 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 CORINQ9Y5Q5 1042 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 CACNA1IQ9P0X4 2223 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 MYH15Q9Y2K3 1946 aa4.5□□□□□ -1.69
SNHG1-220ENST00000544550 WDR87Q6ZQQ6 2873 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 MYH6P13533 1939 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 hCG_1642624A0A1W2PR95 340 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 CASTOR2A6NHX0 329 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 E7EWF7 191 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 H7C4K7 107 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 FANCGO15287 622 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 MEFVO15553 781 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-220ENST00000544550 ADAM12O43184 909 aa4.49□□□□□ -1.69
SNHG1-220ENST00000544550 KLF4O43474 513 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms