RNA–Protein interactions for RNA: ENST00000544140.5

MRPL48-213, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-213ENST00000544140 C11orf74Q86VG3 221 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 GPD1LQ8N335 351 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 ARL14EPQ8N8R7 260 aaPredicted RBP12.91□□□□□ -0.34
MRPL48-213ENST00000544140 OR5B17Q8NGF7 314 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 SH3RF2Q8TEC5 729 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 SMOC1Q9H4F8 434 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 CDH9Q9ULB4 789 aa12.91□□□□□ -0.34
MRPL48-213ENST00000544140 A0A0A0MRY4 1105 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 GOLGA8IPA6NC78 632 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 GOLGA8JA6NMD2 632 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 DCLK1O15075 740 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 ATP2C2O75185 946 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 RHOBTB1O94844 696 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 TMEM191BP0C7N4 346 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 HDCP19113 662 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 PDCP20941 246 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 HOXD13P35453 343 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 USP46P62068 366 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 NOP14P78316 857 aaKnown RBP12.9□□□□□ -0.34
MRPL48-213ENST00000544140 MYO1EQ12965 1108 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 NR1H3Q13133 447 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 MAPRE1Q15691 268 aaKnown RBP12.9□□□□□ -0.34
MRPL48-213ENST00000544140 ELF2Q15723 593 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 PMS2CLQ68D20 193 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 TCEAL6Q6IPX3 200 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 CCDC73Q6ZRK6 1079 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 DENND5BQ6ZUT9 1274 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 ADGRG2Q8IZP9 1017 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 MYCBPAPQ8TBZ2 947 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 TCEAL3Q969E4 200 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 MYLPFQ96A32 169 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 CNOT6LQ96LI5 555 aaKnown RBP12.9□□□□□ -0.34
MRPL48-213ENST00000544140 SYT15Q9BQS2 421 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 TRPC7Q9HCX4 862 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 PANK4Q9NVE7 773 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 WASF3Q9UPY6 502 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 FREM2Q5SZK8 3169 aa12.9□□□□□ -0.34
MRPL48-213ENST00000544140 LNP1A1A4G5 178 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 ZNF840PA6NDX5 716 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 TACC1O75410 805 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 PRPF6O94906 941 aaKnown RBP12.89□□□□□ -0.35
MRPL48-213ENST00000544140 NFATC1O95644 943 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 CAVIN2O95810 425 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 KRT19P08727 400 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 TXLNAP40222 546 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 EIF2DP41214 584 aaKnown RBP12.89□□□□□ -0.35
MRPL48-213ENST00000544140 PPP3CCP48454 512 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 KCNB1Q14721 858 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 SLC39A14Q15043 492 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 SURF1Q15526 300 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 RNF43Q68DV7 783 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 SCN4BQ8IWT1 228 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 OLIG1Q8TAK6 271 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 ANKRD36BP1Q96IX9 119 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 C8orf48Q96LL4 319 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 PCIF1Q9H4Z3 704 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 MAGEC2Q9UBF1 373 aaPredicted RBP12.89□□□□□ -0.35
MRPL48-213ENST00000544140 MMP17Q9ULZ9 603 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 GON4LQ3T8J9 2241 aa12.89□□□□□ -0.35
MRPL48-213ENST00000544140 CACNA1GO43497 2377 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 PKD1L2Q7Z442 2459 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 DSPP15924 2871 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 ASCC3Q8N3C0 2202 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 VPS37CA5D8V6 355 aaPredicted RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 LEFTY2O00292 366 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 OAS1P00973 400 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 IDEP14735 1019 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 BDNFP23560 247 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 PSMC1P62191 440 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 MRPS21P82921 87 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 CRY1Q16526 586 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 USP39Q53GS9 565 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 LMBRD2Q68DH5 695 aaPredicted RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 EPM2AIP1Q7L775 607 aaPredicted RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 CBWD2Q8IUF1 395 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 GLIS3Q8NEA6 775 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 TSTD1Q8NFU3 115 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
MRPL48-213ENST00000544140 EDEM2Q9BV94 578 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 RNF38Q9H0F5 515 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 KIAA1586Q9HCI6 787 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 TMEM30AQ9NV96 361 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 KBTBD4Q9NVX7 518 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 EHD2Q9NZN4 543 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 CACNA1EQ15878 2313 aa12.88□□□□□ -0.35
MRPL48-213ENST00000544140 ATRXP46100 2492 aa12.87□□□□□ -0.35
MRPL48-213ENST00000544140 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms