RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 SOX4Q06945 474 aaPredicted RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 PPP2R5CQ13362 524 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 HNRNPDQ14103 355 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TFDP1Q14186 410 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 PTPAQ15257 358 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TCEA2Q15560 299 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TRIP6Q15654 476 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 FBXO43Q4G163 708 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 USP39Q53GS9 565 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 PEAR1Q5VY43 1037 aaPredicted RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 SYNE3Q6ZMZ3 975 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 RASSF3Q86WH2 238 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 SYT12Q8IV01 421 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 C4orf19Q8IY42 314 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 LSM14AQ8ND56 463 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 BEST2Q8NFU1 509 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 OLIG1Q8TAK6 271 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 BPIFB1Q8TDL5 484 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TBCKQ8TEA7 893 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 ZNF837Q96EG3 531 aaPredicted RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 CAMK1GQ96NX5 476 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 HNRNPABQ99729 332 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 POLR3CQ9BUI4 534 aaPredicted RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TPSD1Q9BZJ3 242 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 FZD8Q9H461 694 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 PDZD7Q9H5P4 517 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 ZNF395Q9H8N7 513 aaPredicted RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 GOLGA2P5Q9HBQ8 144 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 FSCN3Q9NQT6 498 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 GKN1Q9NS71 199 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 VAV3Q9UKW4 847 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TPCN1Q9ULQ1 816 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TBX20Q9UMR3 447 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 YIPF1Q9Y548 306 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 NOTCH2Q04721 2471 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 KNL1Q8NG31 2342 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 ESYT3A0FGR9 886 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 H7C4K7 107 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 IFRD1O00458 451 aaPredicted RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 SYN3O14994 580 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 ARHGAP6O43182 974 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 DKC1O60832 514 aaKnown RBP eCLIP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 OPHN1O60890 802 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 FTH1P19P0C7X4 201 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 CD53P19397 219 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 U2AF2P26368 475 aaKnown RBP eCLIP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 ADD1P35611 737 aaKnown RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 P2RY2P41231 377 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 MASP1P48740 699 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 CYP4F3Q08477 520 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 FOXD4Q12950 439 aaPredicted RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 RUNX3Q13761 415 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 RAPGEF1Q13905 1077 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 FAM187BQ17R55 369 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 CTXN3Q4LDR2 81 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 XKR9Q5GH70 373 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 GLRA4Q5JXX5 417 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 GPR158Q5T848 1215 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 TRIM68Q6AZZ1 485 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 LPCAT2Q7L5N7 544 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 OTUD6AQ7L8S5 288 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 PCGF5Q86SE9 256 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 SLCO6A1Q86UG4 719 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 NOSTRINQ8IVI9 506 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 TMEFF1Q8IYR6 380 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 HDDC3Q8N4P3 179 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 FRMD1Q8N878 549 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 MDGA1Q8NFP4 955 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 TSTD1Q8NFU3 115 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 OR2I1PQ8NGU4 316 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 BICD2Q8TD16 824 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 CCDC12Q8WUD4 166 aaPredicted RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 RUFY2Q8WXA3 655 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 ACDQ96AP0 544 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 CNOT6LQ96LI5 555 aaKnown RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 UROC1Q96N76 676 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 FNBP1Q96RU3 617 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 P2RY13Q9BPV8 354 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 LXNQ9BS40 222 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 GTPBP2Q9BX10 602 aaKnown RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 CCDC113Q9H0I3 377 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 SMG9Q9H0W8 520 aaKnown RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 CRISPLD1Q9H336 500 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 EBF3Q9H4W6 596 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 ZNF358Q9NW07 568 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 THG1LQ9NWX6 298 aaKnown RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 RGL1Q9NZL6 768 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 FBXO9Q9UK97 447 aaPredicted RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 PILRBQ9UKJ0 227 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 USP20Q9Y2K6 914 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 ANKRD17O75179 2603 aaKnown RBP5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 MYO9AB2RTY4 2548 aa5.28□□□□□ -1.56
NPIPB4-219ENST00000543660 TNRC6BQ9UPQ9 1833 aaKnown RBP5.27□□□□□ -1.57
NPIPB4-219ENST00000543660 PTPRBP23467 1997 aa5.27□□□□□ -1.57
NPIPB4-219ENST00000543660 ATXN2Q99700 1313 aaKnown RBP5.27□□□□□ -1.57
NPIPB4-219ENST00000543660 PTPRDP23468 1912 aa5.27□□□□□ -1.57
NPIPB4-219ENST00000543660 SMIM28A0A1B0GU29 152 aa5.27□□□□□ -1.57
NPIPB4-219ENST00000543660 ANTXRLA6NF34 631 aa5.27□□□□□ -1.57
NPIPB4-219ENST00000543660 GOLGA8AA7E2F4 631 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms