RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DONSONQ9NYP3 566 aa9.81□□□□□ -0.84
GNE-206ENST00000543356 DCDC2CA8MYV0 355 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 F8VP50 259 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 FSCN2O14926 492 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 RAD51CO43502 376 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 PHF2O75151 1096 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 ATP2C2O75185 946 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 ZRANB2O95218 330 aaKnown RBP eCLIP9.8□□□□□ -0.84
GNE-206ENST00000543356 TYMPP19971 482 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 GPD1P21695 349 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 ACAT1P24752 427 aaKnown RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 PTPN7P35236 360 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 ZNF143P52747 638 aaPredicted RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 SLC8A3P57103 927 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 FAAP100Q0VG06 881 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 CYP1B1Q16678 543 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 MDH1BQ5I0G3 518 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 ARCQ7LC44 396 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 COLGALT2Q8IYK4 626 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 C12orf50Q8NA57 414 aaPredicted RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 ANKLE1Q8NAG6 615 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 HDAC7Q8WUI4 952 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 RBM41Q96IZ5 413 aaKnown RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 DDX47Q9H0S4 455 aaKnown RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 HIPK3Q9H422 1215 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 TBC1D13Q9NVG8 400 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 DMGDHQ9UI17 866 aaKnown RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 MTUS1Q9ULD2 1270 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 PCDHB8Q9UN66 801 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 CCDC189A1A4V9 331 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 C2CD4BA6NLJ0 364 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 PAPSS1O43252 624 aaPredicted RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 SART1O43290 800 aaKnown RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 LRCH4O75427 683 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 GABBR2O75899 941 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 NPR3P17342 541 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 CHRNA3P32297 505 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 SSR1P43307 286 aaKnown RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 SLC25A11Q02978 314 aaKnown RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 SIX1Q15475 284 aaPredicted RBP9.8□□□□□ -0.84
GNE-206ENST00000543356 TRIM60Q495X7 471 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 MAP9Q49MG5 647 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 PAQR9Q6ZVX9 377 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 RCOR2Q8IZ40 523 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 EMC1Q8N766 993 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 CCDC26Q8TAB7 109 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 MYCBPAPQ8TBZ2 947 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 KCTD13Q8WZ19 329 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 RUNDC3BQ96NL0 473 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 RTP3Q9BQQ7 232 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 ACBD6Q9BR61 282 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 CNPY3Q9BT09 278 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 GDF3Q9NR23 364 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 ASNSD1Q9NWL6 643 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 NR2E1Q9Y466 385 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 PCDHB7Q9Y5E2 793 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 SCN5AQ14524 2016 aa9.8□□□□□ -0.84
GNE-206ENST00000543356 HOXA2O43364 376 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 ATP8B1O43520 1251 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 B4GALT3O60512 393 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 DDHD2O94830 711 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 HEXIM1O94992 359 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 KRT7P08729 469 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 PCK1P35558 622 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 BRCC3P46736 316 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 ATN1P54259 1190 aaPredicted RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 COPS2P61201 443 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 SLC7A5Q01650 507 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 DHX34Q14147 1143 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 HADHQ16836 314 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 CCNI2Q6ZMN8 369 aaPredicted RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 SLC26A9Q7LBE3 791 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 MAATS1Q7Z4T9 603 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 IFT20Q8IY31 132 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 PRELID2Q8N945 189 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 PIWIL1Q96J94 861 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 B3GNT5Q9BYG0 378 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 TIMM13Q9Y5L4 95 aaPredicted RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 PATJQ8NI35 1801 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 DNAH12Q6ZR08 3092 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 I3L4J1 428 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 PIK3R2O00459 728 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 KRT1P04264 644 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 GLI1P08151 1106 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 FAM200BP0CF97 657 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 HSPA8P11142 646 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 TCF4P15884 667 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 CETN2P41208 172 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 TLE2Q04725 743 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 KLF1Q13351 362 aaPredicted RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 PKN2Q16513 984 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 TCTN1Q2MV58 587 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 PAN2Q504Q3 1202 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 INTS6LQ5JSJ4 861 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 BEND6Q5SZJ8 279 aaPredicted RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 TRNP1Q6NT89 227 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 CLEC20AQ6ZU45 233 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 FAM35AQ86V20 835 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 ZNF280BQ86YH2 543 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms