RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	OCRL	Q01968	901 aa		13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	SLC25A11	Q02978	314 aa	Known RBP	13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	ZC3H18	Q86VM9	953 aa	Known RBP	13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	IGDCC3	Q8IVU1	814 aa		13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	WDTC1	Q8N5D0	677 aa		13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	FAM71D	Q8N9W8	422 aa		13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	ZNF518B	Q9C0D4	1074 aa		13.52	□□□□□ -0.24
DDX11-223	ENST00000542838	EFR3B	Q9Y2G0	817 aa		13.52	□□□□□ -0.24
DDX11-223	ENST00000542838		A0A0B4J269	797 aa		13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	MAFG	O15525	162 aa		13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	KRT7	P08729	469 aa		13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	SARNP	P82979	210 aa	Known RBP	13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	ZNF200	P98182	395 aa	Predicted RBP	13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	HADH	Q16836	314 aa	Known RBP	13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	RFX6	Q8HWS3	928 aa		13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	CISH	Q9NSE2	258 aa		13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	ARMCX1	Q9P291	453 aa		13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	SCAF8	Q9UPN6	1271 aa	Known RBP	13.52	□□□□□ -0.25
DDX11-223	ENST00000542838	FAM237B	A0A1B0GVD1	139 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	LRCH4	O75427	683 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	ASS1	P00966	412 aa	Known RBP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	PIGR	P01833	764 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	CD48	P09326	243 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	GNAT1	P11488	350 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	TSHR	P16473	764 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	PGM1	P36871	562 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	CPA2	P48052	419 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	EIF3E	P60228	445 aa	Known RBP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	YWHAG	P61981	247 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	SLC18A2	Q05940	514 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	THOC5	Q13769	683 aa	Known RBP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	KBTBD12	Q3ZCT8	623 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	XKR3	Q5GH77	459 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	SYCP2L	Q5T4T6	812 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	XRRA1	Q6P2D8	792 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	SLC30A9	Q6PML9	568 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	RFX8	Q6ZV50	586 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	JOSD2	Q8TAC2	188 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	RNF146	Q9NTX7	359 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	STX18	Q9P2W9	335 aa	Known RBP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	SCOC	Q9UIL1	159 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	STRIP2	Q9ULQ0	834 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	TCRBV9S1A1T	A0A576	114 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	KBTBD13	C9JR72	458 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	EDN1	P05305	212 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	RARB	P10826	455 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	KRT3	P12035	628 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	NRL	P54845	237 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	MYL6	P60660	151 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	DPYSL3	Q14195	570 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	ABHD15	Q6UXT9	468 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	SCARA5	Q6ZMJ2	495 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	ALYREF	Q86V81	257 aa	Known RBP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	THNSL1	Q8IYQ7	743 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	ARHGAP24	Q8N264	748 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	ARFGAP1	Q8N6T3	406 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	SLC44A1	Q8WWI5	657 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	TFAP2B	Q92481	460 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	NMUR2	Q9GZQ4	415 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	IQCG	Q9H095	443 aa	Known RBP	13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	RIPK3	Q9Y572	518 aa		13.51	□□□□□ -0.25
DDX11-223	ENST00000542838	KAT6A	Q92794	2004 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	SMAP	O00193	183 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	RGS20	O76081	388 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	WEE2	P0C1S8	567 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	EIF4B	P23588	611 aa	Known RBP	13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	NAMPT	P43490	491 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	SERPINB4	P48594	390 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	TGFB2	P61812	414 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	AP1B1	Q10567	949 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	RNF220	Q5VTB9	566 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	FAM161B	Q96MY7	647 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	PPP1R12C	Q9BZL4	782 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	TJP2	Q9UDY2	1190 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	PCSK1N	Q9UHG2	260 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	ASB3	Q9Y575	518 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838		E5RJQ4	531 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	COPE	O14579	308 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	MCF2L	O15068	1137 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	MAP3K7	O43318	606 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	RBP3	P10745	1247 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	PAPOLA	P51003	745 aa	Known RBP	13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	FAM83A	Q86UY5	434 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	KCTD6	Q8NC69	237 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	MTMR12	Q9C0I1	747 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	PIDD1	Q9HB75	910 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838		B2RBV5	119 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	TNFSF9	P41273	254 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	PTPN20	Q4JDL3	420 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	FKBP1C	Q5VVH2	108 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	SH2D5	Q6ZV89	423 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	KIAA0319L	Q8IZA0	1049 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	CCDC110	Q8TBZ0	833 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	WNK4	Q96J92	1243 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	GML	Q99445	158 aa		13.5	□□□□□ -0.25
DDX11-223	ENST00000542838	NIF3L1	Q9GZT8	377 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms