RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 FAM160A1Q05DH4 1040 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 RUNX3Q13761 415 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 ZCWPW2Q504Y3 356 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 TRIM68Q6AZZ1 485 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 SPOPLQ6IQ16 392 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 CC2D1AQ6P1N0 951 aaPredicted RBP17.47■□□□□ 0.39
CCND1-205ENST00000542367 TSSK4Q6SA08 328 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 INTS8Q75QN2 995 aaKnown RBP17.47■□□□□ 0.39
CCND1-205ENST00000542367 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 TAF4BQ92750 862 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 TNIP3Q96KP6 325 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 TTLL2Q9BWV7 592 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 SEMA4AQ9H3S1 761 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 EBF3Q9H4W6 596 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCND1-205ENST00000542367 EHD2Q9NZN4 543 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 TRPM5Q9NZQ8 1165 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 ANAPC1Q9H1A4 1944 aa17.47■□□□□ 0.39
CCND1-205ENST00000542367 KIF26AQ9ULI4 1882 aaPredicted RBP17.46■□□□□ 0.39
CCND1-205ENST00000542367 ASS1P00966 412 aaKnown RBP17.46■□□□□ 0.39
CCND1-205ENST00000542367 LMNAP02545 664 aaKnown RBP17.46■□□□□ 0.39
CCND1-205ENST00000542367 TRIM49P0CI25 452 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 TRIM49CP0CI26 452 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 HDCP19113 662 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 PRCPP42785 496 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 PPP3CAQ08209 521 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 PON2Q15165 354 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 WDR44Q5JSH3 913 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 MAMSTRQ6ZN01 415 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 PAQR9Q6ZVX9 377 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 ACOT1Q86TX2 421 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 EEF2KMTQ96G04 330 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 MED10Q9BTT4 135 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 MMRN2Q9H8L6 949 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 HPS4Q9NQG7 708 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 RBM12Q9NTZ6 932 aaKnown RBP17.46■□□□□ 0.39
CCND1-205ENST00000542367 RMND1Q9NWS8 449 aa17.46■□□□□ 0.39
CCND1-205ENST00000542367 OTOL1A6NHN0 477 aaPredicted RBP17.45■□□□□ 0.38
CCND1-205ENST00000542367 ARSAP15289 507 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 NDST1P52848 882 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 LRRC32Q14392 662 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 GAS6Q14393 721 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 MTF1Q14872 753 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 EDRF1Q3B7T1 1238 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 ADSSL1Q8N142 457 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 NUP93Q8N1F7 819 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 TAS1R2Q8TE23 839 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
CCND1-205ENST00000542367 GSDMAQ96QA5 445 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 KCNK16Q96T55 309 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 IER2Q9BTL4 223 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 PRMT8Q9NR22 394 aaPredicted RBP17.45■□□□□ 0.38
CCND1-205ENST00000542367 PCDHA5Q9Y5H7 936 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
CCND1-205ENST00000542367 ZNF840PA6NDX5 716 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 SMC2O95347 1197 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ABL1P00519 1130 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ASPAP45381 313 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 PPP3CCP48454 512 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 PDE6CP51160 858 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ENPEPQ07075 957 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 IFRD2Q12894 506 aaPredicted RBP17.44■□□□□ 0.38
CCND1-205ENST00000542367 TAF10Q12962 218 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ORC1Q13415 861 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ZNF77Q15935 545 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 DGKKQ5KSL6 1271 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ZNF658Q5TYW1 1059 aaPredicted RBP17.44■□□□□ 0.38
CCND1-205ENST00000542367 FAM35AQ86V20 835 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ATRIPQ8WXE1 791 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 SMARCE1Q969G3 411 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 TIGD1Q96MW7 591 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 IMPG2Q9BZV3 1241 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 APOBEC3GQ9HC16 384 aaKnown RBP17.44■□□□□ 0.38
CCND1-205ENST00000542367 ZSCAN32Q9NX65 697 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 HMGXB4Q9UGU5 601 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 ATP8B3O60423 1300 aa17.44■□□□□ 0.38
CCND1-205ENST00000542367 PTPRZ1P23471 2315 aaPredicted RBP17.43■□□□□ 0.38
CCND1-205ENST00000542367 CFAP54Q96N23 3096 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 CETN3O15182 167 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 KINO60870 393 aaKnown RBP17.43■□□□□ 0.38
CCND1-205ENST00000542367 PFKLP17858 780 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 YWHAQP27348 245 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 CCR3P51677 355 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 USP4Q13107 963 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 PDGFRLQ15198 375 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 Q6ZS52 159 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 UNC93AQ86WB7 457 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 FUKQ8N0W3 1084 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 CRYBG2Q8N1P7 616 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 ZBTB44Q8NCP5 570 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 SH3RF2Q8TEC5 729 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 OSCP1Q8WVF1 389 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 NELL1Q92832 810 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 SMARCD1Q96GM5 515 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 SLITRK1Q96PX8 696 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 RNF38Q9H0F5 515 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 TMEM8AQ9HCN3 771 aa17.43■□□□□ 0.38
CCND1-205ENST00000542367 DUS2Q9NX74 493 aaKnown RBP17.43■□□□□ 0.38
CCND1-205ENST00000542367 HOOK1Q9UJC3 728 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms