RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 APBA1Q02410 837 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 SMARCB1Q12824 385 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 ANGPT1Q15389 498 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 TAF12Q16514 161 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 PHLDB3Q6NSJ2 640 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 PKN3Q6P5Z2 889 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 TSSK4Q6SA08 328 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 INTS8Q75QN2 995 aaKnown RBP13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 FRMD5Q7Z6J6 570 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 TRMT2BQ96GJ1 504 aaKnown RBP13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 CCDC34Q96HJ3 373 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 TTLL2Q9BWV7 592 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 RNF38Q9H0F5 515 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 TMEM8AQ9HCN3 771 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
AP000439.2-201ENST00000542064 HHLA1C9JL84 531 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 ZNF263O14978 683 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 SMC2O95347 1197 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 KRT13P13646 458 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 MRE11P49959 708 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 AP3M2P53677 418 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 INCA1Q0VD86 236 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 MESP2Q0VG99 397 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 LRMPQ12912 555 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 TAF10Q12962 218 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 USP4Q13107 963 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 ZNF77Q15935 545 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 SGSM1Q2NKQ1 1148 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 TCERG1LQ5VWI1 586 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 C4orf50Q6ZRC1 276 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 MON1AQ86VX9 555 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 SFTPA1Q8IWL2 248 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 EZH1Q92800 747 aaPredicted RBP13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 C8orf48Q96LL4 319 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 MED10Q9BTT4 135 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 NIF3L1Q9GZT8 377 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 EBF3Q9H4W6 596 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 FBRSL1Q9HCM7 1045 aaKnown RBP13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 RMND1Q9NWS8 449 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 OSER1Q9NX31 292 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 SMPD4Q9NXE4 827 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 SIT1Q9Y3P8 196 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 R4GN57 208 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 FRYLO94915 3013 aa13.58□□□□□ -0.24
AP000439.2-201ENST00000542064 ZNF840PA6NDX5 716 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 TULP2O00295 520 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 CETN3O15182 167 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 CILPO75339 1184 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 AP1G2O75843 785 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 EPB41P11171 864 aaKnown RBP13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 RFX1P22670 979 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 SLC5A3P53794 718 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 PTPN5P54829 565 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 MAP3K7CLP57077 242 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 GAB4Q2WGN9 574 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 VSTM1Q6UX27 236 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 DENND5BQ6ZUT9 1274 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 ASCL5Q7RTU5 278 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 UBR7Q8N806 425 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 BPIFB1Q8TDL5 484 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 DEPDC1BQ8WUY9 529 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 ATOH1Q92858 354 aaPredicted RBP13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 DNASE1L2Q92874 299 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 P2RY11Q96G91 374 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 ZFRQ96KR1 1074 aaKnown RBP13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 FAM83CQ9BQN1 747 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 ZSWIM1Q9BR11 485 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 LINC00597Q9H2U6 94 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 CCSER2Q9H7U1 834 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 GKN1Q9NS71 199 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 GMIPQ9P107 970 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 ARIH1Q9Y4X5 557 aaPredicted RBP13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 EML5Q05BV3 1969 aa13.57□□□□□ -0.24
AP000439.2-201ENST00000542064 CFAP54Q96N23 3096 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 MDM4O15151 490 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 CHADO15335 359 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 SLC16A3O15427 465 aaKnown RBP13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 CYP26A1O43174 497 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 KIF20AO95235 890 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 CTHP32929 405 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 RAD23BP54727 409 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 UBE2HP62256 183 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 PRKCQQ04759 706 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 DMWDQ09019 674 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 PON2Q15165 354 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 PPP1R26Q5T8A7 1209 aaPredicted RBP13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 KRT39Q6A163 491 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 CLEC20AQ6ZU45 233 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 ARHGEF19Q8IW93 802 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 ELOA2Q8IYF1 753 aaPredicted RBP13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 CRYBG2Q8N1P7 616 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 SLC4A11Q8NBS3 891 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 LMO3Q8TAP4 145 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 SH3RF2Q8TEC5 729 aa13.56□□□□□ -0.24
AP000439.2-201ENST00000542064 MRPS31Q92665 395 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms