RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 TPSD1Q9BZJ3 242 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 MTMR12Q9C0I1 747 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 TMEM9BQ9NQ34 198 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 CRTAC1Q9NQ79 661 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 INTS13Q9NVM9 706 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 TRPM5Q9NZQ8 1165 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 FBXO2Q9UK22 296 aaPredicted RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 INVSQ9Y283 1065 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 ZSCAN21Q9Y5A6 473 aaPredicted RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 SRPRBQ9Y5M8 271 aaKnown RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 A0A0A0MRY4 1105 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 LEFTY2O00292 366 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 KIAA0391O15091 583 aaKnown RBP13.99□□□□□ -0.17
SCARB1-207ENST00000541661 OLFM2O95897 454 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 TMEM191BP0C7N4 346 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-207ENST00000541661 PPP3CCP48454 512 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 SLC7A9P82251 487 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 HSF5Q4G112 596 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-207ENST00000541661 C2orf27AQ580R0 203 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 SH3PXD2AQ5TCZ1 1133 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 DENND5BQ6ZUT9 1274 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 GPD1LQ8N335 351 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 KDF1Q8NAX2 398 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-207ENST00000541661 MYLPFQ96A32 169 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 HPDLQ96IR7 371 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 ANKRD36BP1Q96IX9 119 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 PCIF1Q9H4Z3 704 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 EHD2Q9NZN4 543 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 EVLQ9UI08 416 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-207ENST00000541661 CLIC4Q9Y696 253 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 PLXND1Q9Y4D7 1925 aa13.99□□□□□ -0.17
SCARB1-207ENST00000541661 WDFY3Q8IZQ1 3526 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 PTPRJQ12913 1337 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 ANTXRLA6NF34 631 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 SLC9A3R1O14745 358 aaPredicted RBP13.98□□□□□ -0.17
SCARB1-207ENST00000541661 CYP17A1P05093 508 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 BCKDHBP21953 392 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 WARSP23381 471 aaKnown RBP13.98□□□□□ -0.17
SCARB1-207ENST00000541661 BDNFP23560 247 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 GRIK1P39086 918 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 EIF2DP41214 584 aaKnown RBP13.98□□□□□ -0.17
SCARB1-207ENST00000541661 SEC13P55735 322 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 USP46P62068 366 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 PSMC1P62191 440 aaKnown RBP13.98□□□□□ -0.17
SCARB1-207ENST00000541661 NOP14P78316 857 aaKnown RBP13.98□□□□□ -0.17
SCARB1-207ENST00000541661 IRX4P78413 519 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 ZNF252P-AS1Q0IIN9 211 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 SURF1Q15526 300 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 DUOXA2Q1HG44 320 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 ANO7Q6IWH7 933 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 UNQ6494/PRO21346Q6UXR6 183 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 TMEM92Q6UXU6 159 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 CYP2U1Q7Z449 544 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 MDGA1Q8NFP4 955 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 OR5B17Q8NGF7 314 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 MYCBPAPQ8TBZ2 947 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 C8orf48Q96LL4 319 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 TMEM121BQ9BXQ6 578 aaPredicted RBP13.98□□□□□ -0.17
SCARB1-207ENST00000541661 FGFBP2Q9BYJ0 223 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 RNF38Q9H0F5 515 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 R3HCC1Q9Y3T6 440 aaKnown RBP13.98□□□□□ -0.17
SCARB1-207ENST00000541661 ZZEF1O43149 2961 aa13.98□□□□□ -0.17
SCARB1-207ENST00000541661 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 C1QTNF9BB2RNN3 333 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 PATE3B3GLJ2 98 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-207ENST00000541661 TRIM66O15016 1216 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 ALDH1A2O94788 518 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 OAS1P00973 400 aaKnown RBP13.97□□□□□ -0.17
SCARB1-207ENST00000541661 TNNC2P02585 160 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 C1QTNF9P0C862 333 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 IDEP14735 1019 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 HNRNPLP14866 589 aaKnown RBP eCLIP13.97□□□□□ -0.171e-7■■■■□ 24.5
SCARB1-207ENST00000541661 ANXA13P27216 316 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 TXLNAP40222 546 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 P2RY2P41231 377 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 DHCR24Q15392 516 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 LMBRD2Q68DH5 695 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-207ENST00000541661 RHBDF2Q6PJF5 856 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 CCDC33Q8N5R6 958 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 IL17RCQ8NAC3 791 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 PCED1BQ96HM7 432 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 CLIC6Q96NY7 704 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 PNKPQ96T60 521 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 PANK4Q9NVE7 773 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-207ENST00000541661 MYOFQ9NZM1 2061 aa13.97□□□□□ -0.17
SCARB1-207ENST00000541661 TNFRSF10BO14763 440 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 TACC1O75410 805 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 PRPF6O94906 941 aaKnown RBP13.96□□□□□ -0.17
SCARB1-207ENST00000541661 PDGFRBP09619 1106 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 SLC6A11P48066 632 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 DHPSP49366 369 aaPredicted RBP13.96□□□□□ -0.17
SCARB1-207ENST00000541661 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 FOXC1Q12948 553 aa13.96□□□□□ -0.17
SCARB1-207ENST00000541661 SPDYCQ5MJ68 293 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms