RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SLC1A1P43005 524 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 FSCN1Q16658 493 aaKnown RBP18.02■□□□□ 0.48
SPIDR-227ENST00000541342 IZUMO3Q5VZ72 239 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 PHF13Q86YI8 300 aaPredicted RBP18.02■□□□□ 0.48
SPIDR-227ENST00000541342 CCHCR1Q8TD31 782 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 SPOCK2Q92563 424 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 ZNF570Q96NI8 536 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 ADPGKQ9BRR6 497 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 EIF2AQ9BY44 585 aaKnown RBP18.02■□□□□ 0.48
SPIDR-227ENST00000541342 GRID1Q9ULK0 1009 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 PROSCO94903 275 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 GRM5P41594 1212 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 MSH2P43246 934 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 CLNS1AP54105 237 aaKnown RBP18.02■□□□□ 0.48
SPIDR-227ENST00000541342 TMEM132DQ14C87 1099 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 KYAT1Q16773 422 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 ERICH1Q86X53 443 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 ADAM22Q9P0K1 906 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 CA12O43570 354 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 DARSP14868 501 aaKnown RBP18.01■□□□□ 0.47
SPIDR-227ENST00000541342 PURAQ00577 322 aaKnown RBP18.01■□□□□ 0.47
SPIDR-227ENST00000541342 CCNG2Q16589 344 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 ZNF667Q5HYK9 610 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 CATSPER4Q7RTX7 472 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 MAIP1Q8WWC4 291 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 TRIM11Q96F44 468 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 SMYD3Q9H7B4 428 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 GABRQQ9UN88 632 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 STK38LQ9Y2H1 464 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 POLR2BP30876 1174 aaKnown RBP18.01■□□□□ 0.47
SPIDR-227ENST00000541342 ARHGEF18Q6ZSZ5 1173 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 FAM47EQ6ZV65 393 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 ACTL7BQ9Y614 415 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 GBP2P32456 591 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-227ENST00000541342 MAB21L3Q8N8X9 362 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 SNTG2Q9NY99 539 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 HMGXB4Q9UGU5 601 aa18.01■□□□□ 0.47
SPIDR-227ENST00000541342 RASA4BC9J798 803 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 RASA4O43374 803 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 UNC5CO95185 931 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 ASMTLO95671 621 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 AKR1A1P14550 325 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 DCAF4L1Q3SXM0 396 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 CYP4F22Q6NT55 531 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 WDTC1Q8N5D0 677 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 RBM15Q96T37 977 aaKnown RBP eCLIP18■□□□□ 0.47
SPIDR-227ENST00000541342 OSBPL8Q9BZF1 889 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 KIF9Q9HAQ2 790 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 C2CD2Q9Y426 696 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 HES2Q9Y543 173 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 TCF4P15884 667 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 CDC42EP1Q00587 391 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 CAP1Q01518 475 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 CCDC15Q0P6D6 951 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 ORC1Q13415 861 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 MAMLD1Q13495 774 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 STAT4Q14765 748 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 CRYMQ14894 314 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 FASTKD3Q14CZ7 662 aaKnown RBP18■□□□□ 0.47
SPIDR-227ENST00000541342 TMED2Q15363 201 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 P3H1Q32P28 736 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 SLC27A1Q6PCB7 646 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 ZCCHC9Q8N567 271 aaKnown RBP18■□□□□ 0.47
SPIDR-227ENST00000541342 DENND1AQ8TEH3 1009 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 TRIB2Q92519 343 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 VCPIP1Q96JH7 1222 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 PLCD4Q9BRC7 762 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 VRTNQ9H8Y1 702 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 KIF1CO43896 1103 aaKnown RBP18■□□□□ 0.47
SPIDR-227ENST00000541342 MMP8P22894 467 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 HOXC8P31273 242 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 MAGEA4P43358 317 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 TRABD2AQ86V40 505 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 KATNAL2Q8IYT4 538 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 CCDC89Q8N998 374 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 ZMAT2Q96NC0 199 aaKnown RBP18■□□□□ 0.47
SPIDR-227ENST00000541342 TWNKQ96RR1 684 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 DPP3Q9NY33 737 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 KLHL14Q9P2G3 628 aa18■□□□□ 0.47
SPIDR-227ENST00000541342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18■□□□□ 0.47
SPIDR-227ENST00000541342 SCN1AP35498 2009 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 FAM47DPA6NHR8 397 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 PSTPIP1O43586 416 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 SPAG7O75391 227 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 EIF4BP23588 611 aaKnown RBP17.99■□□□□ 0.47
SPIDR-227ENST00000541342 CCND1P24385 295 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 PSMC4P43686 418 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 C1QBPQ07021 282 aaKnown RBP17.99■□□□□ 0.47
SPIDR-227ENST00000541342 CCDC142Q17RM4 750 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 PLEKHA7Q6IQ23 1121 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 MYLK2Q9H1R3 596 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 KLHL11Q9NVR0 708 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 NKIRAS1Q9NYS0 192 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 NOP53Q9NZM5 478 aaKnown RBP17.99■□□□□ 0.47
SPIDR-227ENST00000541342 PDCD11Q14690 1871 aaKnown RBP17.99■□□□□ 0.47
SPIDR-227ENST00000541342 DIAPH2O60879 1101 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 ABHD2P08910 425 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 CYBAP13498 195 aa17.99■□□□□ 0.47
SPIDR-227ENST00000541342 SKIV2L2P42285 1042 aaKnown RBP17.99■□□□□ 0.47
SPIDR-227ENST00000541342 RAD23BP54727 409 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms