RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FBF1Q8TES7 1133 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 ART4Q93070 314 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 ERP27Q96DN0 273 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 TGS1Q96RS0 853 aaKnown RBP15.04■□□□□ -0
SFSWAP-210ENST00000541286 IFT122Q9HBG6 1241 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 C1orf112Q9NSG2 853 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 UBE4BO95155 1302 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 SRRM3A6NNA2 597 aaPredicted RBP15.04■□□□□ -0
SFSWAP-210ENST00000541286 GSTA1P08263 222 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 RFX1P22670 979 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 ARL2P36404 184 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 EEF1DP3Q658K8 133 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 CWF19L1Q69YN2 538 aaKnown RBP15.04■□□□□ -0
SFSWAP-210ENST00000541286 TRIM4Q9C037 500 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 OCEL1Q9H607 264 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 A0A1W2PQ45 241 aaPredicted RBP15.03■□□□□ -0
SFSWAP-210ENST00000541286 A0A1W2PQY0 241 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 ZCCHC18P0CG32 403 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 CLUL1Q15846 466 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 TBC1D25Q3MII6 688 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 ACAD10Q6JQN1 1059 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 ISLR2Q6UXK2 745 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 APBB1IPQ7Z5R6 666 aaPredicted RBP15.03■□□□□ -0
SFSWAP-210ENST00000541286 DEPTORQ8TB45 409 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 SHC3Q92529 594 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 NKIRAS1Q9NYS0 192 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 ZSCAN5DPP0CG00 497 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 GZMAP12544 262 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 DRG2P55039 364 aaKnown RBP15.03■□□□□ -0
SFSWAP-210ENST00000541286 ITGA7Q13683 1181 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 TMEM270Q6UE05 265 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 KLHDC9Q8NEP7 349 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 HELQQ8TDG4 1101 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 EZH1Q92800 747 aaPredicted RBP15.03■□□□□ -0
SFSWAP-210ENST00000541286 SPC25Q9HBM1 224 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 ARHGEF3Q9NR81 526 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 EXOC7Q9UPT5 735 aa15.03■□□□□ -0
SFSWAP-210ENST00000541286 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.03■□□□□ -0
SFSWAP-210ENST00000541286 ANKRD33BA6NCL7 494 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 ETS2P15036 469 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 TNFSF9P41273 254 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 PTDSS1P48651 473 aaKnown RBP15.02■□□□□ -0
SFSWAP-210ENST00000541286 NFIL3Q16649 462 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 TMEM132AQ24JP5 1023 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 ECHDC2Q86YB7 292 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 PSPC1Q8WXF1 523 aaKnown RBP15.02■□□□□ -0
SFSWAP-210ENST00000541286 SNF8Q96H20 258 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 IFT74Q96LB3 600 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 MYLK2Q9H1R3 596 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 SLCO1B3Q9NPD5 702 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.02■□□□□ -02e-6■■■■■ 31.8
SFSWAP-210ENST00000541286 USH1CQ9Y6N9 552 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 MYO9BQ13459 2157 aa15.02■□□□□ -0
SFSWAP-210ENST00000541286 SMAPO00193 183 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 WDR44Q5JSH3 913 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 AAASQ9NRG9 546 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 CACNG4Q9UBN1 327 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 ZNF148Q9UQR1 794 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 PCDHB4Q9Y5E5 795 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 RASA4BC9J798 803 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 RASA4O43374 803 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 B4GALT4O60513 344 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 RTN3O95197 1032 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 UBTFL6P0CB48 400 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 HOXD8P13378 290 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 KRT15P19012 456 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 PIK3CAP42336 1068 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 DYNLT1P63172 113 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 NFX1Q12986 1120 aaKnown RBP15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 DNAJC3Q13217 504 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 SIX1Q15475 284 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 IZUMO3Q5VZ72 239 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 LMNTD2Q8IXW0 634 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 ANKLE1Q8NAG6 615 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 CD101Q93033 1021 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 TCHPQ9BT92 498 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 APOL6Q9BWW8 343 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 VPS37BQ9H9H4 285 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 TMEM8AQ9HCN3 771 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 KLHL14Q9P2G3 628 aa15.02□□□□□ -0.01
SFSWAP-210ENST00000541286 MEIS3P2A8K0S8 358 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 K7ERI5 159 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 FESP07332 822 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 ETS1P14921 441 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 THPOP40225 353 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 LIG4P49917 911 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 GTF2BQ00403 316 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 RCN2Q14257 317 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 CCDC6Q16204 474 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 RNF180Q86T96 592 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 THNSL1Q8IYQ7 743 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 C4orf33Q8N1A6 199 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 MTG1Q9BT17 334 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 C10orf88Q9H8K7 445 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 STARD7Q9NQZ5 370 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 PCMTD2Q9NV79 361 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 UVRAGQ9P2Y5 699 aa15.01□□□□□ -0.01
SFSWAP-210ENST00000541286 SCN10AQ9Y5Y9 1956 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms