RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PLEKHO2Q8TD55 490 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 TAS1R2Q8TE23 839 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 BORCS6Q96GS4 357 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 RIPOR3Q96MK2 946 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 MED10Q9BTT4 135 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 NIF3L1Q9GZT8 377 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 VPS16Q9H269 839 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 CYP4F11Q9HBI6 524 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 EHD2Q9NZN4 543 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 GCNT4Q9P109 453 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 SIX4Q9UIU6 781 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 GDF2Q9UK05 429 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 FBXL5Q9UKA1 691 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 CDH9Q9ULB4 789 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 ZMIZ1Q9ULJ6 1067 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 POLIQ9UNA4 740 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 PCDHB5Q9Y5E4 795 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 ATP8B3O60423 1300 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 PTPRJQ12913 1337 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 MYH11P35749 1972 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 GTPBP10A4D1E9 387 aaKnown RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 EFSO43281 561 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 TGM5O43548 720 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 VNN1O95497 513 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 PDGFRBP09619 1106 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 WEE2P0C1S8 567 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 SPATA31D3P0C874 917 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 BMP4P12644 408 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ATF2P15336 505 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CD58P19256 250 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 KCNA5P22460 613 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 WARSP23381 471 aaKnown RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ANXA13P27216 316 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 USP8P40818 1118 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CLCN4P51793 760 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 EPHB3P54753 998 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 RPL10AP62906 217 aaKnown RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CYP27A1Q02318 531 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 UBXN1Q04323 297 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ITIH3Q06033 890 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ADCY1Q08828 1119 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 HYAL1Q12794 435 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 LRMPQ12912 555 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 GPR17Q13304 367 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ADAM15Q13444 863 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CAMK1Q14012 370 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 MRPL58Q14197 206 aaKnown RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 MGAT5BQ3V5L5 792 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CBWD6Q4V339 395 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 SLC39A12Q504Y0 691 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CBWD3Q5JTY5 395 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CBWD5Q5RIA9 395 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ATAT1Q5SQI0 421 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CYP26C1Q6V0L0 522 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 SCARA5Q6ZMJ2 495 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 C15orf39Q6ZRI6 1047 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 SPATA31D4Q6ZUB0 917 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ITIH5Q86UX2 942 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 UNC93AQ86WB7 457 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 FMNL3Q8IVF7 1028 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 RNF168Q8IYW5 571 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 SPPL2BQ8TCT7 592 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 JAKMIP2Q96AA8 810 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ZNF512Q96ME7 567 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 HEXIM2Q96MH2 286 aaKnown RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 SYT15Q9BQS2 421 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CLSTN3Q9BQT9 956 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 PI4K2AQ9BTU6 479 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 VN1R3Q9BXE9 311 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 NT5C1AQ9BXI3 368 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 XYLT2Q9H1B5 865 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 SFXN1Q9H9B4 322 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 MAN1C1Q9NR34 630 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 ZDHHC7Q9NXF8 308 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 TAB2Q9NYJ8 693 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 AFF4Q9UHB7 1163 aaKnown RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 KIAA1257Q9ULG3 409 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 BARX2Q9UMQ3 279 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-212ENST00000539975 L1RE1Q9UN81 338 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 COQ4Q9Y3A0 265 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 PCDHGC5Q9Y5F6 944 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 HCFC2Q9Y5Z7 792 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CEP290O15078 2479 aa6.89□□□□□ -1.31
SNHG1-212ENST00000539975 CCDC195A0A1B0GUA6 201 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CBFA2T2O43439 604 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 EFEMP2O95967 443 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 C8AP07357 584 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CELA2BP08218 269 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 TPM1P09493 284 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 HNRNPA1P09651 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CCDC172P0C7W6 258 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 KRT5P13647 590 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 PTPN1P18031 435 aaKnown RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 ACAT1P24752 427 aaKnown RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 GRIK1P39086 918 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 COPB1P53618 953 aaKnown RBP6.88□□□□□ -1.31
SNHG1-212ENST00000539975 CDH8P55286 799 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 ROR1Q01973 937 aa6.88□□□□□ -1.31
SNHG1-212ENST00000539975 GCNT1Q02742 428 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms