RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 GUF1Q8N442 669 aaKnown RBP13.17□□□□□ -0.3
DDX55-206ENST00000539934 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 GBP5Q96PP8 586 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 TEKT3Q9BXF9 490 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 MOSPD1Q9UJG1 213 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 KRT10P13645 584 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 ZNF16P17020 682 aaPredicted RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 PBX1P40424 430 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 EPHB4P54760 987 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 ADKP55263 362 aaKnown RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 PSMC6P62333 389 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 GHRHRQ02643 423 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 EHHADHQ08426 723 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 GRIN2CQ14957 1233 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 FAM26FQ5R3K3 315 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 RAPH1Q70E73 1250 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 CLVS1Q8IUQ0 354 aaPredicted RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 EHBP1Q8NDI1 1231 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 SYTL5Q8TDW5 730 aaPredicted RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 STK32AQ8WU08 396 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 TRIM43Q96BQ3 446 aaPredicted RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 GMIPQ9P107 970 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 NPHP3-ACAD11A0A0J9YXS1 232 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 CETN3O15182 167 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 CRYZL1O95825 349 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 DSG3P32926 999 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 UBXN1Q04323 297 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 LRRC41Q15345 812 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
DDX55-206ENST00000539934 FAM26DQ5JW98 314 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 CENPPQ6IPU0 288 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 C16orf54Q6UWD8 224 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 TC2NQ8N9U0 490 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 TEX19Q8NA77 164 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 FNDC8Q8TC99 324 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 COG1Q8WTW3 980 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 GDAP1L1Q96MZ0 367 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 HEPHQ9BQS7 1158 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 BRINP2Q9C0B6 783 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 HACD3Q9P035 362 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 EMC3Q9P0I2 261 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 PRKAB1Q9Y478 270 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 WDFY4Q6ZS81 3184 aa13.16□□□□□ -0.3
DDX55-206ENST00000539934 NDC80O14777 642 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 ATP9AO75110 1047 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 WFS1O76024 890 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 FGF18O76093 207 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 KRT13P13646 458 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 ZNF3P17036 446 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 EIF2AK2P19525 551 aaKnown RBP13.15□□□□□ -0.3
DDX55-206ENST00000539934 ADCYAP1R1P41586 468 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 CASP2P42575 452 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 MRPS15P82914 257 aaKnown RBP13.15□□□□□ -0.3
DDX55-206ENST00000539934 CTTNQ14247 550 aaKnown RBP13.15□□□□□ -0.3
DDX55-206ENST00000539934 LTBP2Q14767 1821 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 PPP1R7Q15435 360 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 TRIM68Q6AZZ1 485 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
DDX55-206ENST00000539934 PLBD1Q6P4A8 553 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
DDX55-206ENST00000539934 TREML1Q86YW5 311 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 TPH2Q8IWU9 490 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 CCDC116Q8IYX3 515 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 MYCBPAPQ8TBZ2 947 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 CPLX3Q8WVH0 158 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 DYDC2Q96IM9 177 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 CNOT6LQ96LI5 555 aaKnown RBP13.15□□□□□ -0.3
DDX55-206ENST00000539934 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 TAAR1Q96RJ0 339 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 TSG101Q99816 390 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 PCDH12Q9NPG4 1184 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 PKD2L1Q9P0L9 805 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 LOXHD1Q8IVV2 1947 aa13.15□□□□□ -0.3
DDX55-206ENST00000539934 C17orf113A0A1B0GUU1 675 aa13.15□□□□□ -0.31
DDX55-206ENST00000539934 RAC2P15153 192 aa13.15□□□□□ -0.31
DDX55-206ENST00000539934 ITGB5P18084 799 aa13.15□□□□□ -0.31
DDX55-206ENST00000539934 IL10P22301 178 aa13.15□□□□□ -0.31
DDX55-206ENST00000539934 MTIF2P46199 727 aaKnown RBP13.15□□□□□ -0.31
DDX55-206ENST00000539934 MAPKAPK2P49137 400 aa13.15□□□□□ -0.31
DDX55-206ENST00000539934 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.31
DDX55-206ENST00000539934 VSNL1P62760 191 aa13.15□□□□□ -0.31
DDX55-206ENST00000539934 LRRC63Q05C16 580 aa13.15□□□□□ -0.31
DDX55-206ENST00000539934 ARSHQ5FYA8 562 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms