RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MAMLD1Q13495 774 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 TAF12Q16514 161 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 PKDCCQ504Y2 493 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 SEL1L2Q5TEA6 688 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 OR6B2Q6IFH4 312 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 DENND1BQ6P3S1 775 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 SLC26A9Q7LBE3 791 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 SLFN11Q7Z7L1 901 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 PSTKQ8IV42 348 aaKnown RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 FUKQ8N0W3 1084 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 ELMOD1Q8N336 334 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 OVCA2Q8WZ82 227 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 MYLPFQ96A32 169 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 MCRS1Q96EZ8 462 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 PCED1BQ96HM7 432 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 RBM41Q96IZ5 413 aaKnown RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 SPATA17Q96L03 361 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 TWNKQ96RR1 684 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 TBCBQ99426 244 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 CNPY3Q9BT09 278 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 LMAN2LQ9H0V9 348 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 CARD9Q9H257 536 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 CWH43Q9H720 699 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 RC3H2Q9HBD1 1191 aaKnown RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 OLA1Q9NTK5 396 aaKnown RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 DNAJB4Q9UDY4 337 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 AFF4Q9UHB7 1163 aaKnown RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 ZMYM5Q9UJ78 669 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 MTUS1Q9ULD2 1270 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 ASB3Q9Y575 518 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 LTBP2Q14767 1821 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 NDC80O14777 642 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 MOCS3O95396 460 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 SRGAP2BP0DMP2 458 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 ACRP10323 421 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 SLC2A3P11169 496 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 RRM1P23921 792 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 LMO2P25791 158 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
VTN-202ENST00000539746 PCK1P35558 622 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 ALDH1A3P47895 512 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
VTN-202ENST00000539746 ZNF143P52747 638 aaPredicted RBP12.39□□□□□ -0.43
VTN-202ENST00000539746 RWDD2BP57060 319 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 COPS2P61201 443 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 PDE4CQ08493 712 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 ARL13BQ3SXY8 428 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 SLC39A12Q504Y0 691 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 MEI1Q5TIA1 1274 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 PAPD7Q5XG87 772 aaKnown RBP12.39□□□□□ -0.43
VTN-202ENST00000539746 VSIG1Q86XK7 387 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 TNS4Q8IZW8 715 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 SLC35F6Q8N357 371 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 C12orf29Q8N999 325 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 STKLD1Q8NE28 680 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 HASPINQ8TF76 798 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 RIN2Q8WYP3 895 aaPredicted RBP12.39□□□□□ -0.43
VTN-202ENST00000539746 FAM84AQ96KN4 292 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 SLITRK1Q96PX8 696 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
VTN-202ENST00000539746 OSBPL7Q9BZF2 842 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 POPDC2Q9HBU9 364 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 CHST7Q9NS84 486 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 HMGXB4Q9UGU5 601 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 FEZ2Q9UHY8 353 aaPredicted RBP12.39□□□□□ -0.43
VTN-202ENST00000539746 CDC23Q9UJX2 597 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 SNX12Q9UMY4 172 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 PCNTO95613 3336 aa12.39□□□□□ -0.43
VTN-202ENST00000539746 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 TMEM191CA6NGB0 347 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 DPYSL4O14531 572 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 BUB1O43683 1085 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 ZBED1O96006 694 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 RALAP11233 206 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 CCDC130P13994 396 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 GPD1P21695 349 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 PSMA2P25787 234 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 BMPR1AP36894 532 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 PTPN9P43378 593 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 YWHAZP63104 245 aaKnown RBP12.38□□□□□ -0.43
VTN-202ENST00000539746 DEFB103AP81534 67 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 ITIH3Q06033 890 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 MESDQ14696 234 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 PTPN20Q4JDL3 420 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 PABPC1LQ4VXU2 614 aaKnown RBP12.38□□□□□ -0.43
VTN-202ENST00000539746 BOLA3Q53S33 107 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 CLEC20AQ6ZU45 233 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 PIGZQ86VD9 579 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 XYLT1Q86Y38 959 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 NUP93Q8N1F7 819 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 ZNF461Q8TAF7 563 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 UBA3Q8TBC4 463 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 HDAC7Q8WUI4 952 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 MCEEQ96PE7 176 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 CPXM1Q96SM3 734 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 FERMT1Q9BQL6 677 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms