RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 C2CD2Q9Y426 696 aa21.24■□□□□ 0.99
TMEM260-203ENST00000539559 TCRBV5S1A1TA0A578 114 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 DLDP09622 509 aaKnown RBP21.23■□□□□ 0.99
TMEM260-203ENST00000539559 KITP10721 976 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 GCLCP48506 637 aaPredicted RBP21.23■□□□□ 0.99
TMEM260-203ENST00000539559 CDK16Q00536 496 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 MCL1Q07820 350 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 ORC1Q13415 861 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 PDCD7Q8N8D1 485 aaKnown RBP21.23■□□□□ 0.99
TMEM260-203ENST00000539559 LRRN4Q8WUT4 740 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 MARCOQ9UEW3 520 aaPredicted RBP21.23■□□□□ 0.99
TMEM260-203ENST00000539559 FCHO1O14526 889 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 PSMA2P25787 234 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 SARNPP82979 210 aaKnown RBP21.23■□□□□ 0.99
TMEM260-203ENST00000539559 BIRC2Q13490 618 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 LPAR1Q92633 364 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 VPS11Q9H270 941 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 PDLIM7Q9NR12 457 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 UTRNP46939 3433 aa21.23■□□□□ 0.99
TMEM260-203ENST00000539559 DGAT1O75907 488 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 ENO1P06733 434 aaKnown RBP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 NPNTQ6UXI9 565 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 PRPF39Q86UA1 669 aaKnown RBP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 YWHAGP61981 247 aaKnown RBP eCLIP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 SLC34A1Q06495 639 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 C11orf91Q3C1V1 193 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 FOXB2Q5VYV0 432 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 SLC30A9Q6PML9 568 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 ZBTB33Q86T24 672 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 SHKBP1Q8TBC3 707 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 ZNF526Q8TF50 670 aaPredicted RBP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 FAM161BQ96MY7 647 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 SLC38A10Q9HBR0 1119 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 ARHGEF4Q9NR80 690 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 PAPOLBQ9NRJ5 636 aaKnown RBP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 KBTBD13C9JR72 458 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 H3BRJ5 948 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 WDR46O15213 610 aaKnown RBP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 TM9SF1O15321 606 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 LMNAP02545 664 aaKnown RBP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 ETV4P43268 484 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 MYL6P60660 151 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 PRKD1Q15139 912 aaPredicted RBP21.22■□□□□ 0.99
TMEM260-203ENST00000539559 KLHL38Q2WGJ6 581 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 TREML1Q86YW5 311 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 ZNF398Q8TD17 642 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 STMN2Q93045 179 aa21.22■□□□□ 0.99
TMEM260-203ENST00000539559 TCRBV9S1A1TA0A576 114 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 RGS20O76081 388 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 UBTFL6P0CB48 400 aaPredicted RBP21.21■□□□□ 0.99
TMEM260-203ENST00000539559 PGM1P36871 562 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 NEK3P51956 506 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 CES4AQ5XG92 561 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 OR52E8Q6IFG1 317 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 CCDC62Q6P9F0 684 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 MCPH1Q8NEM0 835 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 NLGN2Q8NFZ4 835 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 HSPH1Q92598 858 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 OXNAD1Q96HP4 312 aaPredicted RBP21.21■□□□□ 0.99
TMEM260-203ENST00000539559 MTMR12Q9C0I1 747 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 ZCWPW1Q9H0M4 648 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.21■□□□□ 0.99
TMEM260-203ENST00000539559 MAP3K6O95382 1288 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 NR3C2P08235 984 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 RASA2Q15283 850 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 PDIK1LQ8N165 341 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 ATP6V0A1Q93050 837 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 CFAP36Q96G28 342 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 C17orf75Q9HAS0 396 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 SSU72Q9NP77 194 aaKnown RBP21.21■□□□□ 0.99
TMEM260-203ENST00000539559 KRT82Q9NSB4 513 aa21.21■□□□□ 0.99
TMEM260-203ENST00000539559 CTDP1Q9Y5B0 961 aaPredicted RBP21.21■□□□□ 0.99
TMEM260-203ENST00000539559 CNTNAP2Q9UHC6 1331 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 WDR81Q562E7 1941 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 B2RBV5 119 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 K7ERI5 159 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 SMAPO00193 183 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 CYB561D2O14569 222 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 KIF3CO14782 793 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 LRCH4O75427 683 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 CALB1P05937 261 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 FESP07332 822 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 PAPOLAP51003 745 aaKnown RBP21.2■□□□□ 0.98
TMEM260-203ENST00000539559 KDSRQ06136 332 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 MMRN1Q13201 1228 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 EMC2Q15006 297 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 HSF5Q4G112 596 aaPredicted RBP21.2■□□□□ 0.98
TMEM260-203ENST00000539559 RFX6Q8HWS3 928 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 CCNJLQ8IV13 435 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 CTAGE3PQ8IX95 158 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 SLC25A41Q8N5S1 370 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 SH3GL3Q99963 347 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 TRIM56Q9BRZ2 755 aaKnown RBP21.2■□□□□ 0.98
TMEM260-203ENST00000539559 SLC9A2Q9UBY0 812 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 LRCH1Q9Y2L9 728 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 SLC25A11Q02978 314 aaKnown RBP21.2■□□□□ 0.98
TMEM260-203ENST00000539559 LBRQ14739 615 aaKnown RBP21.2■□□□□ 0.98
TMEM260-203ENST00000539559 PPP1R15BQ5SWA1 713 aa21.2■□□□□ 0.98
TMEM260-203ENST00000539559 NBPF12Q5TAG4 269 aaPredicted RBP21.2■□□□□ 0.98
TMEM260-203ENST00000539559 FAXCQ5TGI0 409 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms