RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 RRP15Q9Y3B9 282 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 CSH1P0DML2 217 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 CSH2P0DML3 217 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ATF2P15336 505 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 CDC25CP30307 473 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ZNF211Q13398 564 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 PSMD6Q15008 389 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 PRSS55Q6UWB4 352 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 DNAJB4Q9UDY4 337 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ATP8B1O43520 1251 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ATP1A1P05023 1023 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 HNRNPA1P09651 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 SMAD4Q13485 552 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 SGO2Q562F6 1265 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 RILPQ96NA2 401 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 SYT15Q9BQS2 421 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 TRAIPQ9BWF2 469 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 TRIM49P0CI25 452 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 TRIM49CP0CI26 452 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ATP11AP98196 1134 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ECM1Q16610 540 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 FBXL13Q8NEE6 735 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 PLCB1Q9NQ66 1216 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 DNAJC12Q9UKB3 198 aa12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 BARX2Q9UMQ3 279 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-206ENST00000537971 ZNF185O15231 689 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 BMP6P22004 513 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 HOXC8P31273 242 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 PFKPQ01813 784 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 HIC1Q14526 733 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 E2F5Q15329 346 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 DDX47Q9H0S4 455 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 SNX24Q9Y343 169 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 A0A0B4J269 797 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 RNF8O76064 485 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 RPL17P18621 184 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 TYMPP19971 482 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 MYBPC2Q14324 1141 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 TTC30AQ86WT1 665 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 ZMYM5Q9UJ78 669 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 CYBBP04839 570 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 AMHR2Q16671 573 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 CCDC14Q49A88 953 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 RSRC1Q96IZ7 334 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 NT5C1AQ9BXI3 368 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 C1QTNF1Q9BXJ1 281 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 HCN4Q9Y3Q4 1203 aa12.84□□□□□ -0.35
TSPAN9-206ENST00000537971 ADORA2BP29275 332 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 VSNL1P62760 191 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 PPP2R5EQ16537 467 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 SDCCAG8Q86SQ7 713 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 CROCCP2Q86T23 111 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 LRRC52Q8N7C0 313 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 MAIP1Q8WWC4 291 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 KLHL5Q96PQ7 755 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 TRIM62Q9BVG3 475 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 GOLGA2P5Q9HBQ8 144 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 MTCH2Q9Y6C9 303 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 PPM1FP49593 454 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 KRT81Q14533 505 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 RTN4RL1Q86UN2 441 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 TC2NQ8N9U0 490 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 MKNK1Q9BUB5 465 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 AFF4Q9UHB7 1163 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 ASB3Q9Y575 518 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 ACSL3O95573 720 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 SAT1P21673 171 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 EDRF1Q3B7T1 1238 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 MAP7D1Q3KQU3 841 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 SMG8Q8ND04 991 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 FLCNQ8NFG4 579 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 ADAMTS19Q8TE59 1207 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 C18orf25Q96B23 403 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 HAUS1Q96CS2 278 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 HEMGNQ9BXL5 484 aa12.83□□□□□ -0.36
TSPAN9-206ENST00000537971 H7C0C1 242 aa12.82□□□□□ -0.36
TSPAN9-206ENST00000537971 SGK1O00141 431 aa12.82□□□□□ -0.36
TSPAN9-206ENST00000537971 RHOBTB3O94955 611 aa12.82□□□□□ -0.36
TSPAN9-206ENST00000537971 BRD2P25440 801 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-206ENST00000537971 ATP5OP48047 213 aa12.82□□□□□ -0.36
TSPAN9-206ENST00000537971 IL17AQ16552 155 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms