RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GALNTL6Q49A17 601 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 C6orf183Q5T699 404 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 SEL1L3Q68CR1 1132 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 KRT28Q7Z3Y7 464 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 GIMAP8Q8ND71 665 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 RNF139Q8WU17 664 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 RNFT2Q96EX2 444 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 WDR12Q9GZL7 423 aaKnown RBP5.87□□□□□ -1.47
CSMD1-215ENST00000537824 LACRTQ9GZZ8 138 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 TMEM117Q9H0C3 514 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 EPB41L1Q9H4G0 881 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 NDFIP2Q9NV92 336 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 ZSWIM5Q9P217 1185 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 COQ6Q9Y2Z9 468 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 STON1Q9Y6Q2 735 aa5.87□□□□□ -1.47
CSMD1-215ENST00000537824 P4HBP07237 508 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 CNPY1Q3B7I2 92 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 OTUD3Q5T2D3 398 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 XXYLT1Q8NBI6 393 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 COPS7BQ9H9Q2 264 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PLCL2Q9UPR0 1127 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ZBTB11O95625 1053 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ALOX5P09917 674 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 NELFEP18615 380 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 OSTNP61366 133 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 RMDN1Q96DB5 314 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 DCAF5Q96JK2 942 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 WDR11Q9BZH6 1224 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TRIM17Q9Y577 477 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MYOFQ9NZM1 2061 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 A1BGP04217 495 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 GNA15P30679 374 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SRP54P61011 504 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MMRN1Q13201 1228 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 FAM160B1Q5W0V3 765 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MICALL2Q8IY33 904 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SPATA18Q8TC71 538 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MAGEC3Q8TD91 643 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 USP13Q92995 863 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SGF29Q96ES7 293 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 RIBC2Q9H4K1 309 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TUFT1Q9NNX1 390 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SH3GLB2Q9NR46 395 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 FBXO28Q9NVF7 368 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MED13Q9UHV7 2174 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ATP8B3O60423 1300 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 E5RI56 91 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 LDLRP01130 860 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 DBTP11182 482 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 POU1F1P28069 291 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 FNTAP49354 379 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 POU5F1Q01860 360 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 NRF1Q16656 503 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SAPCD2Q86UD0 394 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 BEST2Q8NFU1 509 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 HTRA1Q92743 480 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 LY9Q9HBG7 655 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PNMA6FA0A0J9YX94 578 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 CASP4P49662 377 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 DLG4P78352 724 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 HSF2Q03933 536 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TRADDQ15628 312 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 RRM2BQ7LG56 351 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 KRT74Q7RTS7 529 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 CHSY1Q86X52 802 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 CPA5Q8WXQ8 436 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 UBXN6Q9BZV1 441 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 BCS1LQ9Y276 419 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 AK5Q9Y6K8 562 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PMF1-BGLAPU3KQ54 211 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SSU72P8A0A1W2PR75 194 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 HEATR9A2RTY3 570 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF37AP17032 561 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ITGAXP20702 1163 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 IL12AP29459 219 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MAPK6Q16659 721 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 GPR107Q5VW38 600 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TUBA3EQ6PEY2 450 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MTHFD1LQ6UB35 978 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 KCTD1Q719H9 257 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TAF8Q7Z7C8 310 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MCEEQ96PE7 176 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 DOCK3Q8IZD9 2030 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SHANK2Q9UPX8 1470 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PRKAB2O43741 272 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 UBXN2AP68543 259 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TRAF3Q13114 568 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TSNQ15631 228 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 CARTPTQ16568 116 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TBCELQ5QJ74 424 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 GALNT18Q6P9A2 607 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 NET1Q7Z628 596 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 C9orf16Q9BUW7 83 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TRPV5Q9NQA5 729 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 UBA2Q9UBT2 640 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SYNPO2Q9UMS6 1093 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ZHX2Q9Y6X8 837 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 CLRN2A0PK11 232 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms