RNA–Protein interactions for RNA: ENST00000536586.5

CD9-206, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 739 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-206ENST00000536586 KXD1Q9BQD3 176 aa14.56□□□□□ -0.08
CD9-206ENST00000536586 ATXN3LQ9H3M9 355 aa14.56□□□□□ -0.08
CD9-206ENST00000536586 MYO18AQ92614 2054 aaKnown RBP14.55□□□□□ -0.08
CD9-206ENST00000536586 ATG2BQ96BY7 2078 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 GTPBP10A4D1E9 387 aaKnown RBP14.55□□□□□ -0.08
CD9-206ENST00000536586 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 AFPP02771 609 aaKnown RBP14.55□□□□□ -0.08
CD9-206ENST00000536586 CCDC130P13994 396 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 GRIK1P39086 918 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 VIPR2P41587 438 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 MLLT6P55198 1093 aaPredicted RBP14.55□□□□□ -0.08
CD9-206ENST00000536586 STARD6P59095 220 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 GCNT1Q02742 428 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 WDR44Q5JSH3 913 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 MIIPQ5JXC2 388 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 GPR158Q5T848 1215 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 ARHGAP17Q68EM7 881 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 SCN4BQ8IWT1 228 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 CMTM8Q8IZV2 173 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 ZNF687Q8N1G0 1237 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 FBXL6Q8N531 539 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 CCDC150Q8NCX0 1101 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 ENOX1Q8TC92 643 aaKnown RBP14.55□□□□□ -0.08
CD9-206ENST00000536586 FAM200AQ8TCP9 573 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 SLC2A14Q8TDB8 520 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 CYFIP2Q96F07 1278 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 CNOT6LQ96LI5 555 aaKnown RBP14.55□□□□□ -0.08
CD9-206ENST00000536586 UBXN6Q9BZV1 441 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 PNPLA8Q9NP80 782 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.55□□□□□ -0.08
CD9-206ENST00000536586 TMEM63CQ9P1W3 806 aa14.55□□□□□ -0.08
CD9-206ENST00000536586 ARIH1Q9Y4X5 557 aaPredicted RBP14.55□□□□□ -0.08
CD9-206ENST00000536586 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.55□□□□□ -0.08
CD9-206ENST00000536586 ZNF840PA6NDX5 716 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 HEPACAM2A8MVW5 462 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 PSMC3P17980 439 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 TBXAS1P24557 533 aaPredicted RBP14.54□□□□□ -0.08
CD9-206ENST00000536586 PPP3CCP48454 512 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 ZNF132P52740 706 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 ORC1Q13415 861 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 PKDCCQ504Y2 493 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 PPP1R26Q5T8A7 1209 aaPredicted RBP14.54□□□□□ -0.08
CD9-206ENST00000536586 CWF19L1Q69YN2 538 aaKnown RBP14.54□□□□□ -0.08
CD9-206ENST00000536586 PHLDB3Q6NSJ2 640 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 RIN3Q8TB24 985 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 OVCA2Q8WZ82 227 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 DNASE1L2Q92874 299 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 JAKMIP2Q96AA8 810 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 PBXIP1Q96AQ6 731 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 TMEM176AQ96HP8 235 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 KREMEN1Q96MU8 473 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 SLC22A12Q96S37 553 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 DMAP1Q9NPF5 467 aaPredicted RBP14.54□□□□□ -0.08
CD9-206ENST00000536586 DACH1Q9UI36 760 aa14.54□□□□□ -0.08
CD9-206ENST00000536586 ATP8B3O60423 1300 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 RNF225M0QZC1 329 aaPredicted RBP14.53□□□□□ -0.08
CD9-206ENST00000536586 RTN3O95197 1032 aaPredicted RBP14.53□□□□□ -0.08
CD9-206ENST00000536586 OAS1P00973 400 aaKnown RBP14.53□□□□□ -0.08
CD9-206ENST00000536586 CD58P19256 250 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 CLCN5P51795 746 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 ZXDBP98169 803 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 ARHGAP15Q53QZ3 475 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 CDKAL1Q5VV42 579 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 TXNDC8Q6A555 127 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 ARHGEF19Q8IW93 802 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 ZNF276Q8N554 614 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 KIAA1958Q8N8K9 716 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 KAT5Q92993 513 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 USP13Q92995 863 aaPredicted RBP14.53□□□□□ -0.08
CD9-206ENST00000536586 DUSP16Q9BY84 665 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 SAMSN1Q9NSI8 373 aaKnown RBP14.53□□□□□ -0.08
CD9-206ENST00000536586 FAM49BQ9NUQ9 324 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 EHD2Q9NZN4 543 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 MAGED2Q9UNF1 606 aaPredicted RBP14.53□□□□□ -0.08
CD9-206ENST00000536586 USP3Q9Y6I4 520 aa14.53□□□□□ -0.08
CD9-206ENST00000536586 CHADO15335 359 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 AP1G2O75843 785 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 CFHP08603 1231 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 PRKCSHP14314 528 aaPredicted RBP14.52□□□□□ -0.09
CD9-206ENST00000536586 FZD5Q13467 585 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 MAN2A1Q16706 1144 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 RAB41Q5JT25 222 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 CCDC183Q5T5S1 534 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 CELF5Q8N6W0 485 aaKnown RBP14.52□□□□□ -0.09
CD9-206ENST00000536586 MAB21L3Q8N8X9 362 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 SCAMP5Q8TAC9 235 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 MRPS31Q92665 395 aaKnown RBP14.52□□□□□ -0.09
CD9-206ENST00000536586 NT5C1BQ96P26 610 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 FAM83CQ9BQN1 747 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 ZSWIM1Q9BR11 485 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 TRMT61BQ9BVS5 477 aaKnown RBP14.52□□□□□ -0.09
CD9-206ENST00000536586 RNF38Q9H0F5 515 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 INTS2Q9H0H0 1204 aaKnown RBP14.52□□□□□ -0.09
CD9-206ENST00000536586 KCNH6Q9H252 994 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 HSD3B7Q9H2F3 369 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 SIX2Q9NPC8 291 aa14.52□□□□□ -0.09
CD9-206ENST00000536586 KRT82Q9NSB4 513 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms