RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TTC39CQ8N584 583 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 LEMD2Q8NC56 503 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 PLA2G2FQ9BZM2 168 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 NAT10Q9H0A0 1025 aaKnown RBP18.96■□□□□ 0.63
DDX55-204ENST00000536079 KCNK12Q9HB15 430 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 ACP6Q9NPH0 428 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 APEX2Q9UBZ4 518 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 CNTN6Q9UQ52 1028 aa18.96■□□□□ 0.63
DDX55-204ENST00000536079 BDP1A6H8Y1 2624 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 LRRC10BA6NIK2 292 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 PNMA6AP0CW24 399 aaPredicted RBP18.95■□□□□ 0.62
DDX55-204ENST00000536079 ANXA13P27216 316 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 PGFP49763 221 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 ARHGAP44Q17R89 818 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 ARHGAP17Q68EM7 881 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 DENND5BQ6ZUT9 1274 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 RBBP8NLQ8NC74 664 aaPredicted RBP18.95■□□□□ 0.62
DDX55-204ENST00000536079 JAKMIP2Q96AA8 810 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 RSPRY1Q96DX4 576 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 TRMT2BQ96GJ1 504 aaKnown RBP18.95■□□□□ 0.62
DDX55-204ENST00000536079 TTLL2Q9BWV7 592 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 LSM14BQ9BX40 385 aaKnown RBP18.95■□□□□ 0.62
DDX55-204ENST00000536079 FAM124BQ9H5Z6 455 aaPredicted RBP18.95■□□□□ 0.62
DDX55-204ENST00000536079 EPHX3Q9H6B9 360 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 DMAP1Q9NPF5 467 aaPredicted RBP18.95■□□□□ 0.62
DDX55-204ENST00000536079 DNAJC12Q9UKB3 198 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 NUMBLQ9Y6R0 609 aa18.95■□□□□ 0.62
DDX55-204ENST00000536079 TULP2O00295 520 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 EPHB6O15197 1021 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 FAM200BP0CF97 657 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 CD19P15391 556 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 BRD2P25440 801 aaKnown RBP18.94■□□□□ 0.62
DDX55-204ENST00000536079 SLC5A3P53794 718 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 YWHAEP62258 255 aaKnown RBP18.94■□□□□ 0.62
DDX55-204ENST00000536079 IFRD2Q12894 506 aaPredicted RBP18.94■□□□□ 0.62
DDX55-204ENST00000536079 GPR158Q5T848 1215 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 KLHDC7AQ5VTJ3 777 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 TXNDC8Q6A555 127 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 TANGO2Q6ICL3 276 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 KXD1Q9BQD3 176 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 SLC46A2Q9BY10 475 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 DUSP16Q9BY84 665 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 GPR88Q9GZN0 384 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 SMG9Q9H0W8 520 aaKnown RBP18.94■□□□□ 0.62
DDX55-204ENST00000536079 GDE1Q9NZC3 331 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 FHOD1Q9Y613 1164 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 ATP8B3O60423 1300 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 TRIOO75962 3097 aa18.94■□□□□ 0.62
DDX55-204ENST00000536079 LGALS16A8MUM7 142 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 O00370 1275 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 NARSO43776 548 aaKnown RBP18.93■□□□□ 0.62
DDX55-204ENST00000536079 VDRP11473 427 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 KRT5P13647 590 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 CDK11BP21127 795 aaKnown RBP18.93■□□□□ 0.62
DDX55-204ENST00000536079 VIPR2P41587 438 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 GOLGA7BQ2TAP0 167 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 NUP93Q8N1F7 819 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 SLC44A3Q8N4M1 653 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 UBA3Q8TBC4 463 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 ZSCAN18Q8TBC5 510 aaPredicted RBP18.93■□□□□ 0.62
DDX55-204ENST00000536079 SHC3Q92529 594 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 ASB16Q96NS5 453 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 LRRC3BQ96PB8 259 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 SLC22A12Q96S37 553 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
DDX55-204ENST00000536079 GANQ9H2C0 597 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 IL37Q9NZH6 218 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 TSPAN16Q9UKR8 245 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 SIK3Q9Y2K2 1263 aa18.93■□□□□ 0.62
DDX55-204ENST00000536079 ZFP37Q9Y6Q3 630 aaPredicted RBP18.93■□□□□ 0.62
DDX55-204ENST00000536079 GREB1Q4ZG55 1949 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 C2orf78A6NCI8 922 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 SMTNL1A8MU46 457 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 FOXN3O00409 490 aaPredicted RBP18.92■□□□□ 0.62
DDX55-204ENST00000536079 TEX33O43247 280 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 CFHP08603 1231 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 PAEPP09466 180 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 NPR3P17342 541 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 CDC25CP30307 473 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 MFAP3P55082 362 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 TAF10Q12962 218 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 SGO2Q562F6 1265 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 MAB21L3Q8N8X9 362 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 CEP295NLQ96MC4 621 aa18.92■□□□□ 0.62
DDX55-204ENST00000536079 NAP1L5Q96NT1 182 aaPredicted RBP18.92■□□□□ 0.62
DDX55-204ENST00000536079 PI4K2BG5E9Z4 385 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 DCXO43602 365 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 GABBR2O75899 941 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 PRAMEF12O95522 483 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 FGF19O95750 216 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 PKDCCQ504Y2 493 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 ANKRD52Q8NB46 1076 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 CYP2S1Q96SQ9 504 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 SLITRK6Q9H5Y7 841 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 TASP1Q9H6P5 420 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 CHORDC1Q9UHD1 332 aaPredicted RBP18.91■□□□□ 0.62
DDX55-204ENST00000536079 MYO10Q9HD67 2058 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 NCOR1O75376 2440 aa18.91■□□□□ 0.62
DDX55-204ENST00000536079 ZNF840PA6NDX5 716 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms