RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 PCDHGA2Q9Y5H1 932 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 RALGAPA1Q6GYQ0 2036 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 MYOFQ9NZM1 2061 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 FRYLO94915 3013 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 SLC38A8A6NNN8 435 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 IKBKBO14920 756 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 LILRB5O75023 590 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 TADA3O75528 432 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 KIF20AO95235 890 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 PAPSS2O95340 614 aaPredicted RBP11.53□□□□□ -0.56
CCDC60-202ENST00000535685 LMNAP02545 664 aaKnown RBP11.53□□□□□ -0.56
CCDC60-202ENST00000535685 C4BPAP04003 597 aaKnown RBP11.53□□□□□ -0.56
CCDC60-202ENST00000535685 TDGF1P13385 188 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 CTHP32929 405 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 GNL1P36915 607 aaPredicted RBP11.53□□□□□ -0.56
CCDC60-202ENST00000535685 GPR15P49685 360 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 DDR2Q16832 855 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 SYNPOQ8N3V7 929 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 PLEKHO2Q8TD55 490 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 CCDC127Q96BQ5 260 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 TTLL2Q9BWV7 592 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 TDP1Q9NUW8 608 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 THG1LQ9NWX6 298 aaKnown RBP11.53□□□□□ -0.56
CCDC60-202ENST00000535685 ZSCAN32Q9NX65 697 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 VPS9D1Q9Y2B5 631 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 SDK1Q7Z5N4 2213 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 CACNA1AO00555 2505 aa11.53□□□□□ -0.56
CCDC60-202ENST00000535685 SPECC1L-ADORA2AF8WAN1 911 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 HCRTO43612 131 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 ATP2C2O75185 946 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 RPN1P04843 607 aaKnown RBP11.52□□□□□ -0.57
CCDC60-202ENST00000535685 CCNE1P24864 410 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 AVPR1AP37288 418 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 PPP3CCP48454 512 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 NDUFA8P51970 172 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 NOP14P78316 857 aaKnown RBP11.52□□□□□ -0.57
CCDC60-202ENST00000535685 DPYDQ12882 1025 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 MTAPQ13126 283 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 TRPC3Q13507 836 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 LRRC32Q14392 662 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 KCNB1Q14721 858 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 ITPRIPL2Q3MIP1 535 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 WDR72Q3MJ13 1102 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 DGKKQ5KSL6 1271 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 MAB21L3Q8N8X9 362 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 USP13Q92995 863 aaPredicted RBP11.52□□□□□ -0.57
CCDC60-202ENST00000535685 MYLPFQ96A32 169 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 CCDC47Q96A33 483 aaKnown RBP11.52□□□□□ -0.57
CCDC60-202ENST00000535685 PCED1BQ96HM7 432 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 C8orf48Q96LL4 319 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 MMS19Q96T76 1030 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 MRPL45Q9BRJ2 306 aaKnown RBP11.52□□□□□ -0.57
CCDC60-202ENST00000535685 LMAN1LQ9HAT1 526 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 EHD2Q9NZN4 543 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 GCNT4Q9P109 453 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 NME7Q9Y5B8 376 aa11.52□□□□□ -0.57
CCDC60-202ENST00000535685 MYO16Q9Y6X6 1858 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 LRRIQ3A6PVS8 624 aaPredicted RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 KINO60870 393 aaKnown RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 NR3C1P04150 777 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 PTPN1P18031 435 aaKnown RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 HOXA6P31267 233 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 PDE6CP51160 858 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 CCR3P51677 355 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 NRLP54845 237 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 MYL6P60660 151 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 TNNC1P63316 161 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 CSTF1Q05048 431 aaKnown RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 FAM160A1Q05DH4 1040 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 CCDC142Q17RM4 750 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 ZACNQ401N2 412 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 SDHAF4Q5VUM1 108 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 TDRD10Q5VZ19 366 aaKnown RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 TXNDC8Q6A555 127 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 KRBA2Q6ZNG9 492 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 ADSSL1Q8N142 457 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 GUF1Q8N442 669 aaKnown RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 FSIP1Q8NA03 581 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 SUMF1Q8NBK3 374 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 TAF4BQ92750 862 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 SNX25Q9H3E2 840 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 GKN1Q9NS71 199 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 GTSE1Q9NYZ3 720 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 NDRG2Q9UN36 371 aaKnown RBP11.51□□□□□ -0.57
CCDC60-202ENST00000535685 R4GN57 208 aa11.51□□□□□ -0.57
CCDC60-202ENST00000535685 TRAV19A0A0A6YYK7 116 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
CCDC60-202ENST00000535685 CALUO43852 315 aaPredicted RBP11.5□□□□□ -0.57
CCDC60-202ENST00000535685 ZNF202O95125 648 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 VNN1O95497 513 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 USP17L7P0C7H9 530 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 BDNFP23560 247 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 CASP4P49662 377 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 CDR1P51861 262 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
CCDC60-202ENST00000535685 USP4Q13107 963 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms