RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 MSCO60682 206 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 HNRNPCL1O60812 293 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 MYBP10242 640 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 ALADP13716 330 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 NQO1P15559 274 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 PNLIPP16233 465 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 ATP2A2P16615 1042 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 HSPA6P17066 643 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 KCNA3P22001 575 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 ADORA1P30542 326 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 MCM7P33993 719 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 EPS15P42566 896 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 MASP1P48740 699 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 RASSF2P50749 326 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 MAGOHP61326 146 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 GPSM2P81274 684 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 ROR2Q01974 943 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 ZNF844Q08AG5 666 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 BLMHQ13867 455 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 OLFML2BQ68BL8 750 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 DENND2CQ68D51 928 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 MIS18BP1Q6P0N0 1132 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 PDXDC1Q6P996 788 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 BTNL9Q6UXG8 535 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 BZW1Q7L1Q6 419 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 RRAGAQ7L523 313 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 DCP2Q8IU60 420 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 IRF2BP1Q8IU81 584 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 TBC1D16Q8TBP0 767 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 ZFAND2BQ8WV99 257 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 DYDC1Q8WWB3 177 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 ITFG2Q969R8 447 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 MAGOHBQ96A72 148 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 C7orf25Q9BPX7 421 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 MYL10Q9BUA6 226 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 TLR10Q9BXR5 811 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 RAB34Q9BZG1 259 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 COA1Q9GZY4 146 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 SLC6A17Q9H1V8 727 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 IPPKQ9H8X2 491 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 MLXIPQ9HAP2 919 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 CRTAC1Q9NQ79 661 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 AGPAT5Q9NUQ2 364 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 TXLNGQ9NUQ3 528 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 INTS9Q9NV88 658 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 CTTNBP2NLQ9P2B4 639 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 EBF1Q9UH73 591 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 ADGRE2Q9UHX3 823 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 CNOT7Q9UIV1 285 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 ANAPC4Q9UJX5 808 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 RPL26L1Q9UNX3 145 aaKnown RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 MAPRE3Q9UPY8 281 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 GDAQ9Y2T3 454 aa7.03□□□□□ -1.28
USP28-202ENST00000535607 COL1A1P02452 1464 aaPredicted RBP7.03□□□□□ -1.28
USP28-202ENST00000535607 SRCAPQ6ZRS2 3230 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 ARVCFO00192 962 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 RGS16O15492 202 aaPredicted RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 KPNA6O60684 536 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 SMIM24O75264 130 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 PALMO75781 387 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 GFPT2O94808 682 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 MPOP05164 745 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 MMEP08473 750 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 GSTA2P09210 222 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 NUDT17P0C025 328 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 SCG2P13521 617 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 FPR2P25090 351 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 HIBADHP31937 336 aaKnown RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 CXCR5P32302 372 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 GUCY1A2P33402 732 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 TRHRP34981 398 aaPredicted RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 MCAMP43121 646 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 PHKA1P46020 1223 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 CCNHP51946 323 aaPredicted RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 ERVFC1P60507 584 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 ASIC1P78348 528 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 MXRA7P84157 204 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 TAF11Q15544 211 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 KCNMB1Q16558 191 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 SLC18A3Q16572 532 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 PTPROQ16827 1216 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 FAM153CQ494X1 144 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 PIK3R6Q5UE93 754 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 CDCA2Q69YH5 1023 aaPredicted RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 ZCCHC8Q6NZY4 707 aaKnown RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 PIGWQ7Z7B1 504 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 SESTD1Q86VW0 696 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 KLHL7Q8IXQ5 586 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 RPUSD2Q8IZ73 545 aaKnown RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 ARHGAP18Q8N392 663 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 SPATA5Q8NB90 893 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 MIPOL1Q8TD10 442 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 NEK9Q8TD19 979 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 KLHL29Q96CT2 875 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 FAM84BQ96KN1 310 aaPredicted RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 TARS2Q9BW92 718 aaKnown RBP7.02□□□□□ -1.29
USP28-202ENST00000535607 KIF9Q9HAQ2 790 aa7.02□□□□□ -1.29
USP28-202ENST00000535607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP28-202ENST00000535607 ARHGAP20Q9P2F6 1191 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms