RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 PCED1BQ96HM7 432 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 IER2Q9BTL4 223 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 KCTD10Q9H3F6 313 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 DPEP3Q9H4B8 488 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 KIF9Q9HAQ2 790 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 GKN1Q9NS71 199 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 RBM12Q9NTZ6 932 aaKnown RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 TDP1Q9NUW8 608 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 ATP6V1DQ9Y5K8 247 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 HELZP42694 1942 aaKnown RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 TRAV19A0A0A6YYK7 116 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 A8MXQ7 604 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 TRIM66O15016 1216 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 CALUO43852 315 aaPredicted RBP9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 STAU1O95793 577 aaKnown RBP9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 MYL1P05976 194 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 RAP1GAPP47736 663 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 CCR3P51677 355 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 AP3M2P53677 418 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 SATB1Q01826 763 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 FAM160A1Q05DH4 1040 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 NCOA4Q13772 614 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 ZNF268Q14587 947 aaPredicted RBP9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 PPP2R5DQ14738 602 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 ZNF699Q32M78 642 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 ITPRIPL2Q3MIP1 535 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 ZNF667Q5HYK9 610 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 VSTM1Q6UX27 236 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 Q6ZS52 159 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 SLC9A9Q8IVB4 645 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 RIN3Q8TB24 985 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 PARD3BQ8TEW8 1205 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 ATRIPQ8WXE1 791 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 ELMO3Q96BJ8 720 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 SPATA17Q96L03 361 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 MYRFLQ96LU7 910 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 SCAND2PQ9GZW5 306 aaPredicted RBP9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 XYLT2Q9H1B5 865 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 GOLPH3LQ9H4A5 285 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 EBF3Q9H4W6 596 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 SMYD3Q9H7B4 428 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 GDPD2Q9HCC8 539 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 HPS4Q9NQG7 708 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 DMAC2Q9NW81 257 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 ZSCAN32Q9NX65 697 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 PAXBP1Q9Y5B6 917 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 PCDHGA2Q9Y5H1 932 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 USP34Q70CQ2 3546 aa9.1□□□□□ -0.95
SFSWAP-202ENST00000535202 F5P12259 2224 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 FAM237AA0A1B0GTK4 181 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 A0A1W2PQ27 194 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 A0A1W2PQ64 194 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 A0A1W2PQD8 194 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 C2orf78A6NCI8 922 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 SMTNL1A8MU46 457 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 GOLGA6L6A8MZA4 724 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 F8VP50 259 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 CLDN5O00501 218 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 PDXKO00764 312 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 C4BPAP04003 597 aaKnown RBP9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 FAM163BP0C2L3 166 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 USP17L7P0C7H9 530 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 ARSAP15289 507 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 PTPN1P18031 435 aaKnown RBP9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 CDH8P55286 799 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 USP46P62068 366 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 DLG4P78352 724 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 DPYDQ12882 1025 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 IFRD2Q12894 506 aaPredicted RBP9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 USP4Q13107 963 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 RUNX3Q13761 415 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 GAS6Q14393 721 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 KCNB1Q14721 858 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 MTF1Q14872 753 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 WDR44Q5JSH3 913 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 DGKKQ5KSL6 1271 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 KRBA2Q6ZNG9 492 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 DENND5BQ6ZUT9 1274 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 ARL14EPQ8N8R7 260 aaPredicted RBP9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 ZBTB44Q8NCP5 570 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 B3GALNT2Q8NCR0 500 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 KIAA1524Q8TCG1 905 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 SLC22A12Q96S37 553 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 CYP2S1Q96SQ9 504 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 FAM83CQ9BQN1 747 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 MED10Q9BTT4 135 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 ZNF518BQ9C0D4 1074 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 ELOVL4Q9GZR5 314 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 MAPK8IP1Q9UQF2 711 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 FRMD4BQ9Y2L6 1034 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 MYO15AQ9UKN7 3530 aa9.09□□□□□ -0.95
SFSWAP-202ENST00000535202 ATP8B3O60423 1300 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 OTOL1A6NHN0 477 aaPredicted RBP9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 LILRB5O75023 590 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 RHOBTB3O94955 611 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 ZNF202O95125 648 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 VNN1O95497 513 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 ABL1P00519 1130 aa9.08□□□□□ -0.96
SFSWAP-202ENST00000535202 TDGF1P13385 188 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms