RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 C14orf93Q9H972 538 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TMBIM4Q9HC24 238 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 LUC7LQ9NQ29 371 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PPANQ9NQ55 473 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 INIPQ9NRY2 104 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ATP8A2Q9NTI2 1148 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 GJB4Q9NTQ9 266 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CCM2LQ9NUG4 571 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 AATFQ9NY61 560 aaKnown RBP eCLIP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SPATA7Q9P0W8 599 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ATXN10Q9UBB4 475 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ADD3Q9UEY8 706 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 TUBGCP4Q9UGJ1 667 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZMYND8Q9ULU4 1186 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 DNM3Q9UQ16 869 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 SPEF1Q9Y4P9 236 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 PPP2R3BQ9Y5P8 575 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 BZW2Q9Y6E2 419 aaKnown RBP3.44□□□□□ -1.86
CSDE1-216ENST00000534389 NUMBLQ9Y6R0 609 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 MYH15Q9Y2K3 1946 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ADGRB3O60242 1522 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 BCL9O00512 1426 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 CRB1P82279 1406 aa3.44□□□□□ -1.86
CSDE1-216ENST00000534389 ZSCAN5CA6NGD5 496 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MROH6A6NGR9 719 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PES1O00541 588 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SH2B2O14492 632 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PLSCR1O15162 318 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SPTLC2O15270 562 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CREB3O43889 395 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 B4GALT4O60513 344 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 OPHN1O60890 802 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 HSF2BPO75031 334 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 TAF5LO75529 589 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SURF6O75683 361 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 GFPT2O94808 682 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 YEATS4O95619 227 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MPIG6BO95866 241 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 KNG1P01042 644 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 KRT1P04264 644 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ALDH2P05091 517 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 KRT16P08779 473 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CLTAP09496 248 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MYBP10242 640 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF28P17035 718 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 BMP7P18075 431 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PSMA5P28066 241 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MARCKSP29966 332 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CASP14P31944 242 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CARSP49589 748 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 NEK2P51955 445 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 EPHB1P54762 984 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PER3P56645 1201 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MGAT5Q09328 741 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 KIF5AQ12840 1032 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SF3A3Q12874 501 aaKnown RBP eCLIP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SLC39A6Q13433 755 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MORC3Q14149 939 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PDCD1Q15116 288 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 STK38Q15208 465 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ANKRD1Q15327 319 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 TTF1Q15361 905 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 TAF11Q15544 211 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 UAP1Q16222 522 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC57Q2TAC2 916 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 UAP1L1Q3KQV9 507 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PLEKHG6Q3KR16 790 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 GLE1Q53GS7 698 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC157Q569K6 752 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CMPK2Q5EBM0 449 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ZBTB41Q5SVQ8 909 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF362Q5T0B9 420 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 NT5DC1Q5TFE4 455 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 DUS1LQ6P1R4 473 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ARHGEF18Q6ZSZ5 1173 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PPP1R42Q7Z4L9 355 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PLEKHH3Q7Z736 793 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PIGWQ7Z7B1 504 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 TMEM110Q86TL2 294 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 WDR75Q8IWA0 830 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 GRAMD1CQ8IYS0 662 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CACNA2D3Q8IZS8 1091 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 KLHL36Q8N4N3 616 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 KIF2BQ8N4N8 673 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MREGQ8N565 214 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 NUDT10Q8NFP7 164 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 MDM1Q8TC05 714 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 CASKIN2Q8WXE0 1202 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ZCCHC14Q8WYQ9 949 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 P3H4Q92791 437 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 JAKMIP2Q96AA8 810 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 DACT3Q96B18 629 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 DTNBP1Q96EV8 351 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 NUDT11Q96G61 164 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 PAWRQ96IZ0 340 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF317Q96PQ6 595 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 UHRF1Q96T88 793 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ASPSCR1Q9BZE9 553 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 IQCGQ9H095 443 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ZCCHC4Q9H5U6 513 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms