RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 CHST7Q9NS84 486 aa10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 FNIP2Q9P278 1114 aa10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 HMGXB4Q9UGU5 601 aa10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 ADAM28Q9UKQ2 775 aa10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 L1RE1Q9UN81 338 aa10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 NME7Q9Y5B8 376 aa10.65□□□□□ -0.7
LDLRAD3-206ENST00000534091 SF3B1O75533 1304 aaKnown RBP eCLIP10.64□□□□□ -0.714e-7■■■■■ 133.7
LDLRAD3-206ENST00000534091 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 CES2O00748 559 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 GABRDO14764 452 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 TRAPPC3O43617 180 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 LILRB3O75022 631 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 CLASP2O75122 1294 aaKnown RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 GLP2RO95838 553 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 CALCAP01258 141 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 CFHP08603 1231 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 TCP1P17987 556 aaKnown RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 GTF2F1P35269 517 aaKnown RBP eCLIP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 NOP2P46087 812 aaKnown RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 GLUD2P49448 558 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 CLCNKBP51801 687 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 AFF1P51825 1210 aaKnown RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 DSG1Q02413 1049 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 WHAMMP3Q1A5X7 153 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 USP41Q3LFD5 358 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 MEI1Q5TIA1 1274 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 LIN9Q5TKA1 542 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 PLEKHA7Q6IQ23 1121 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 ANKRD54Q6NXT1 300 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 TMEM173Q86WV6 379 aaPredicted RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 DNAAF5Q86Y56 855 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 ADGRF2Q8IZF7 708 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 PDCL2Q8N4E4 241 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 MSANTD4Q8NCY6 345 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 ZNF564Q8TBZ8 553 aaPredicted RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 NECTIN4Q96NY8 510 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 TLR10Q9BXR5 811 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 RXFP1Q9HBX9 757 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 MRPL47Q9HD33 250 aaKnown RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 OSGEPQ9NPF4 335 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 MARCH5Q9NX47 278 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 ADAM22Q9P0K1 906 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 CNOT8Q9UFF9 292 aaKnown RBP10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 LCMT1Q9UIC8 334 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 STRIP2Q9ULQ0 834 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 SNX12Q9UMY4 172 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 HYOU1Q9Y4L1 999 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 SAR1BQ9Y6B6 198 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 SCINQ9Y6U3 715 aa10.64□□□□□ -0.71
LDLRAD3-206ENST00000534091 UNC80Q8N2C7 3258 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 MTCL1Q9Y4B5 1905 aaKnown RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 TCRBV5S1A1TA0A578 114 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 C19orf67A6NJJ6 358 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 HIDE1A8MVS5 230 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 A8MXQ7 604 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 M0QZQ0 153 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 CYB561D2O14569 222 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 B4GALT3O60512 393 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 TADA2AO75478 443 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 MICAL2O94851 1124 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 SLU7O95391 586 aaKnown RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 PAPLNO95428 1278 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 CYP11A1P05108 521 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 ADH1AP07327 375 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 GNL1P36915 607 aaPredicted RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 GPD2P43304 727 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 GABRB2P47870 512 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 LHX1P48742 406 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 KIAA0319Q5VV43 1072 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 KIAA1841Q6NSI8 718 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 FUT10Q6P4F1 479 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 DCLRE1AQ6PJP8 1040 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 CD300LGQ6UXG3 332 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 EP400NLQ6ZTU2 488 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 RTL10Q7L3V2 364 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 RBM23Q86U06 439 aaKnown RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 WDTC1Q8N5D0 677 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 C1orf131Q8NDD1 294 aaKnown RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 C3orf58Q8NDZ4 430 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 OR6B3Q8NGW1 331 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 BCL7CQ8WUZ0 217 aaPredicted RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 CPA5Q8WXQ8 436 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 SUSD6Q92537 303 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 TNIP3Q96KP6 325 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 SENP8Q96LD8 212 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 HEXIM2Q96MH2 286 aaKnown RBP10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 C11orf70Q9BRQ4 267 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 NUP85Q9BW27 656 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 MIS12Q9H081 205 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 SNX25Q9H3E2 840 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 CTTNBP2NLQ9P2B4 639 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 WDR35Q9P2L0 1181 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 DSEQ9UL01 958 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 HCFC2Q9Y5Z7 792 aa10.63□□□□□ -0.71
LDLRAD3-206ENST00000534091 CASTOR2A6NHX0 329 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms