RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CD58P19256 250 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CTHP32929 405 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 MAGEA11P43364 429 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 PXNP49023 591 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-215ENST00000533946 SNRPFP62306 86 aaKnown RBP10.26□□□□□ -0.77
SSBP3-215ENST00000533946 TAF10Q12962 218 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 ADAM9Q13443 819 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF77Q15935 545 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CBWD6Q4V339 395 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CBWD3Q5JTY5 395 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CBWD5Q5RIA9 395 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 FSTL4Q6MZW2 842 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF852Q6ZMS4 543 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 DPH6Q7L8W6 267 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 FAM186BQ8IYM0 893 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 SPATA20Q8TB22 786 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 BPIFB1Q8TDL5 484 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 TMEM174Q8WUU8 243 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 DNASE1L2Q92874 299 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 IRF7Q92985 503 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 JAKMIP2Q96AA8 810 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 MED15Q96RN5 788 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 DUSP9Q99956 384 aaKnown RBP10.26□□□□□ -0.77
SSBP3-215ENST00000533946 VRTNQ9H8Y1 702 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 ABCB6Q9NP58 842 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 ZDHHC4Q9NPG8 344 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 OSER1Q9NX31 292 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 EML5Q05BV3 1969 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CEP250Q9BV73 2442 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF840PA6NDX5 716 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 HHLA1C9JL84 531 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 TULP2O00295 520 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 MDM4O15151 490 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 TBX18O95935 607 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ABL1P00519 1130 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 EGFP01133 1207 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ADORA2BP29275 332 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 CDC25CP30307 473 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 PIK3CAP42336 1068 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 KPNA1P52294 538 aaPredicted RBP10.25□□□□□ -0.77
SSBP3-215ENST00000533946 RPL10AP62906 217 aaKnown RBP10.25□□□□□ -0.77
SSBP3-215ENST00000533946 PFKPQ01813 784 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 FAM160A1Q05DH4 1040 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 LPAL2Q16609 132 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF394Q53GI3 561 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ARHGAP15Q53QZ3 475 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF667Q5HYK9 610 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 DENND5BQ6ZUT9 1274 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 FAM35AQ86V20 835 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 YAF2Q8IY57 180 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ADSSL1Q8N142 457 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 SLC2A14Q8TDB8 520 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 SH3RF2Q8TEC5 729 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 DEPDC1BQ8WUY9 529 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 NDRG1Q92597 394 aaKnown RBP10.25□□□□□ -0.77
SSBP3-215ENST00000533946 KAT5Q92993 513 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 TRMT2BQ96GJ1 504 aaKnown RBP10.25□□□□□ -0.77
SSBP3-215ENST00000533946 SHDQ96IW2 340 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 ZFRQ96KR1 1074 aaKnown RBP10.25□□□□□ -0.77
SSBP3-215ENST00000533946 CCSER2Q9H7U1 834 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 GMIPQ9P107 970 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 CGNQ9P2M7 1197 aaKnown RBP10.25□□□□□ -0.77
SSBP3-215ENST00000533946 NUDT5Q9UKK9 219 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 KIAA1549LQ6ZVL6 1849 aa10.25□□□□□ -0.77
SSBP3-215ENST00000533946 DPYSL4O14531 572 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 TRIM24O15164 1050 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CALUO43852 315 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CLSTN1O94985 981 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CKMP06732 381 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 HDCP19113 662 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 WEE1P30291 646 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 ATICP31939 592 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 SLC6A11P48066 632 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 GALK1P51570 392 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 STX17P56962 302 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 MAP3K7CLP57077 242 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 MCCD1P59942 119 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-215ENST00000533946 SMARCB1Q12824 385 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 RUNX3Q13761 415 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CCINQ13939 588 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 BECN1Q14457 450 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 MTF1Q14872 753 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 NFIL3Q16649 462 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 EML3Q32P44 896 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 C12orf40Q86WS4 652 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 ZC3H3Q8IXZ2 948 aaKnown RBP10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CELF5Q8N6W0 485 aaKnown RBP10.24□□□□□ -0.77
SSBP3-215ENST00000533946 SUMF1Q8NBK3 374 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 GOLGA5Q8TBA6 731 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 CSGALNACT1Q8TDX6 532 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 MRPS31Q92665 395 aaKnown RBP10.24□□□□□ -0.77
SSBP3-215ENST00000533946 SYAP1Q96A49 352 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-215ENST00000533946 FUBP3Q96I24 572 aaKnown RBP eCLIP10.24□□□□□ -0.77
SSBP3-215ENST00000533946 SPATA17Q96L03 361 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 PRRX2Q99811 253 aa10.24□□□□□ -0.77
SSBP3-215ENST00000533946 MED10Q9BTT4 135 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms