RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SFTPA1Q8IWL2 248 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 CCDC65Q8IXS2 484 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 FSIP1Q8NA03 581 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 RDH13Q8NBN7 331 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 USP33Q8TEY7 942 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 DDX1Q92499 740 aaKnown RBP19.28■□□□□ 0.68
UBXN1-216ENST00000533908 TTLL2Q9BWV7 592 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 KBTBD4Q9NVX7 518 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 ZNF840PA6NDX5 716 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 LEFTY2O00292 366 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 SCAMP3O14828 347 aaKnown RBP19.27■□□□□ 0.68
UBXN1-216ENST00000533908 KIAA0391O15091 583 aaKnown RBP19.27■□□□□ 0.68
UBXN1-216ENST00000533908 TNNC2P02585 160 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 PMLP29590 882 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 CYP27A1Q02318 531 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 DENND5BQ6ZUT9 1274 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 WDR49Q8IV35 697 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 ADGRG2Q8IZP9 1017 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 MYCBPAPQ8TBZ2 947 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 ZNF507Q8TCN5 953 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 MMS19Q96T76 1030 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 LSM14BQ9BX40 385 aaKnown RBP19.27■□□□□ 0.68
UBXN1-216ENST00000533908 GZF1Q9H116 711 aaPredicted RBP19.27■□□□□ 0.68
UBXN1-216ENST00000533908 VPS45Q9NRW7 570 aa19.27■□□□□ 0.68
UBXN1-216ENST00000533908 ABCA7Q8IZY2 2146 aa19.27■□□□□ 0.67
UBXN1-216ENST00000533908 PTPRDP23468 1912 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 F8VP50 259 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 CHRM1P11229 460 aaPredicted RBP19.26■□□□□ 0.67
UBXN1-216ENST00000533908 HNRNPLP14866 589 aaKnown RBP eCLIP19.26■□□□□ 0.67
UBXN1-216ENST00000533908 GNL1P36915 607 aaPredicted RBP19.26■□□□□ 0.67
UBXN1-216ENST00000533908 SLC6A11P48066 632 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 NASPP49321 788 aaPredicted RBP19.26■□□□□ 0.67
UBXN1-216ENST00000533908 DGKEP52429 567 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 SEC13P55735 322 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 NR1H3Q13133 447 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 SURF1Q15526 300 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 ST3GAL2Q16842 350 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 C2orf27AQ580R0 203 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 MDH1BQ5I0G3 518 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 LINC00301Q8NCQ3 95 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 ZNF516Q92618 1163 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 TRIM9Q9C026 710 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 DPEP3Q9H4B8 488 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 FOXD4L1Q9NU39 408 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 TRPM5Q9NZQ8 1165 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 TFIP11Q9UBB9 837 aaKnown RBP19.26■□□□□ 0.67
UBXN1-216ENST00000533908 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
UBXN1-216ENST00000533908 USP24Q9UPU5 2620 aa19.26■□□□□ 0.67
UBXN1-216ENST00000533908 HELZP42694 1942 aaKnown RBP19.25■□□□□ 0.67
UBXN1-216ENST00000533908 BCLAF3A2AJT9 711 aaKnown RBP19.25■□□□□ 0.67
UBXN1-216ENST00000533908 OLFM2O95897 454 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 CYP17A1P05093 508 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 NOP14P78316 857 aaKnown RBP19.25■□□□□ 0.67
UBXN1-216ENST00000533908 SLC7A9P82251 487 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 CREB5Q02930 508 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 MAPRE1Q15691 268 aaKnown RBP19.25■□□□□ 0.67
UBXN1-216ENST00000533908 FILIP1Q7Z7B0 1213 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 CCDC33Q8N5R6 958 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 EXOC4Q96A65 974 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 ACDQ96AP0 544 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 CHAMP1Q96JM3 812 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 C8orf48Q96LL4 319 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 CEP295NLQ96MC4 621 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 TPSD1Q9BZJ3 242 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 TNMDQ9H2S6 317 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 AGPAT3Q9NRZ7 376 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 SMPD4Q9NXE4 827 aa19.25■□□□□ 0.67
UBXN1-216ENST00000533908 CLIC2O15247 247 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 TACC1O75410 805 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 RHOBTB1O94844 696 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 KCNK5O95279 499 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 NFATC1O95644 943 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 CAVIN2O95810 425 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 DLATP10515 647 aaKnown RBP19.24■□□□□ 0.67
UBXN1-216ENST00000533908 PTPN1P18031 435 aaKnown RBP19.24■□□□□ 0.67
UBXN1-216ENST00000533908 BCKDHBP21953 392 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 TAF10Q12962 218 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 ELF2Q15723 593 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 SNRNP35Q16560 246 aaKnown RBP19.24■□□□□ 0.67
UBXN1-216ENST00000533908 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 RNF43Q68DV7 783 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 RHBDF2Q6PJF5 856 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 TMEM92Q6UXU6 159 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 HS2ST1Q7LGA3 356 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 RASSF3Q86WH2 238 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 TSTD1Q8NFU3 115 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 CCDC127Q96BQ5 260 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 B3GNT5Q9BYG0 378 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 ZNF518BQ9C0D4 1074 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 KIAA1586Q9HCI6 787 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 CPQQ9Y646 472 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 LAMA1P25391 3075 aa19.24■□□□□ 0.67
UBXN1-216ENST00000533908 CLDN5O00501 218 aa19.23■□□□□ 0.67
UBXN1-216ENST00000533908 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
UBXN1-216ENST00000533908 ABL1P00519 1130 aa19.23■□□□□ 0.67
UBXN1-216ENST00000533908 OAS1P00973 400 aaKnown RBP19.23■□□□□ 0.67
UBXN1-216ENST00000533908 PFKLP17858 780 aa19.23■□□□□ 0.67
UBXN1-216ENST00000533908 TNNI1P19237 187 aa19.23■□□□□ 0.67
UBXN1-216ENST00000533908 ANXA13P27216 316 aa19.23■□□□□ 0.67
UBXN1-216ENST00000533908 CASP1P29466 404 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms