RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 JADE1Q6IE81 842 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PLEKHA7Q6IQ23 1121 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 VSTM1Q6UX27 236 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ASRGL1Q7L266 308 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 FITM2Q8N6M3 262 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 USP6NLQ92738 828 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 C18orf8Q96DM3 657 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SGF29Q96ES7 293 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TSPAN18Q96SJ8 248 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TMEM120AQ9BXJ8 343 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 KCTD10Q9H3F6 313 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SPC25Q9HBM1 224 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PCDH18Q9HCL0 1135 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 NMRK1Q9NWW6 199 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DCTN4Q9UJW0 460 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 FEM1BQ9UK73 627 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 MAPRE3Q9UPY8 281 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 EVPLLA8MZ36 301 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 CABYRO75952 493 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SRGAP2CP0DJJ0 459 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ADARP55265 1226 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 FKBP1AP62942 108 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 KCNJ2P63252 427 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 GALNTL6Q49A17 601 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SUSD4Q5VX71 490 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SCARA3Q6AZY7 606 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 LRP10Q7Z4F1 713 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 LINC00523Q86TU6 105 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SVOPQ8N4V2 548 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 MDM1Q8TC05 714 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 HELQQ8TDG4 1101 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PIGBQ92521 554 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 FAF2Q96CS3 445 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SH3GL1Q99961 368 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ING2Q9H160 280 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 JMJD4Q9H9V9 463 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DSEQ9UL01 958 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PCDHB4Q9Y5E5 795 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 M0R3G1 203 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 FOXN3O00409 490 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 GSC2O15499 205 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DDX3YO15523 660 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 PLA2G6O60733 806 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 IL18RAPO95256 599 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 POLBP06746 335 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ITGAVP06756 1048 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ADRA1DP25100 572 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DYNLL1P63167 89 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 FKBP1CQ5VVH2 108 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ZNF746Q6NUN9 644 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 ADGRD1Q6QNK2 874 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 MTDHQ86UE4 582 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 C4orf33Q8N1A6 199 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 KCNV2Q8TDN2 545 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 NSUN6Q8TEA1 469 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 DENND2DQ9H6A0 471 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 SYNDIG1Q9H7V2 258 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TOPORSQ9NS56 1045 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 TBK1Q9UHD2 729 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 APPL1Q9UKG1 709 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DUSP10Q9Y6W6 482 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PRAMEF22A3QJZ6 481 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TRIM38O00635 465 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PLEKP08567 350 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 TRIM49P0CI25 452 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TRIM49CP0CI26 452 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 CRKLP46109 303 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 IFI35P80217 286 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 SNRNP35Q16560 246 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 SPOPLQ6IQ16 392 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DPP8Q6V1X1 898 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 FAM43BQ6ZT52 329 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 PQLC1Q8N2U9 271 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ALG3Q92685 438 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 GLG1Q92896 1179 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 CCDC97Q96F63 343 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 CGRRF1Q99675 332 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 RHOBTB2Q9BYZ6 727 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 CELF4Q9BZC1 486 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 WDR12Q9GZL7 423 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 NDEL1Q9GZM8 345 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TRPV6Q9H1D0 765 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 LRRC40Q9H9A6 602 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DDX18Q9NVP1 670 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 TAS2R1Q9NYW7 299 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 HAO1Q9UJM8 370 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PTPN22Q9Y2R2 807 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SAGE2PA6NJ88 616 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 AQP12BA6NM10 295 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 RNF225M0QZC1 329 aaPredicted RBP4.2□□□□□ -1.74
SOX6-217ENST00000533870 RPLP2P05387 115 aaKnown RBP4.2□□□□□ -1.74
SOX6-217ENST00000533870 TPP2P29144 1249 aaPredicted RBP4.2□□□□□ -1.74
SOX6-217ENST00000533870 ATICP31939 592 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 GABRB2P47870 512 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 TRPC1P48995 793 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 GPC3P51654 580 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 GTF2BQ00403 316 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 MVKQ03426 396 aa4.2□□□□□ -1.74
SOX6-217ENST00000533870 EFTUD2Q15029 972 aaKnown RBP eCLIP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms