RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 SCN4BQ8IWT1 228 aa23.07■■□□□ 1.28
VPS51-212ENST00000533656 TFAP2BQ92481 460 aa23.07■■□□□ 1.28
VPS51-212ENST00000533656 UBXN6Q9BZV1 441 aa23.07■■□□□ 1.28
VPS51-212ENST00000533656 GRPEL1Q9HAV7 217 aa23.07■■□□□ 1.28
VPS51-212ENST00000533656 AIPL1Q9NZN9 384 aa23.07■■□□□ 1.28
VPS51-212ENST00000533656 PCDHGC3Q9UN70 934 aa23.07■■□□□ 1.28
VPS51-212ENST00000533656 FAM86C2PA6NEL3 165 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 F8VP50 259 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 RFPL2O75678 378 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 CSH1P0DML2 217 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 CSH2P0DML3 217 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 ATF6P18850 670 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 CDC25BP30305 580 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 SFMBT2Q5VUG0 894 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 CLEC20AQ6ZU45 233 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 LEMD2Q8NC56 503 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 EPS8L1Q8TE68 723 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 PSMG2Q969U7 264 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 ZNF512Q96ME7 567 aaPredicted RBP23.06■■□□□ 1.28
VPS51-212ENST00000533656 C1QTNF1Q9BXJ1 281 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 ADAM7Q9H2U9 754 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 COMMD8Q9NX08 183 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 CD207Q9UJ71 328 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 CEP83Q9Y592 693 aa23.06■■□□□ 1.28
VPS51-212ENST00000533656 M0QYV0 167 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 XPO1O14980 1071 aaKnown RBP23.05■■□□□ 1.28
VPS51-212ENST00000533656 MICAL2O94851 1124 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 KRT9P35527 623 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 ASIC2Q16515 512 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 RARS2Q5T160 578 aaKnown RBP23.05■■□□□ 1.28
VPS51-212ENST00000533656 TMC6Q7Z403 805 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.05■■□□□ 1.28
VPS51-212ENST00000533656 GPR149Q86SP6 731 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 TTC30AQ86WT1 665 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 GJD3Q8N144 294 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 SMRP1Q8NCR6 262 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 ZNF707Q96C28 371 aaPredicted RBP23.05■■□□□ 1.28
VPS51-212ENST00000533656 SMOQ99835 787 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 ZSWIM1Q9BR11 485 aa23.05■■□□□ 1.28
VPS51-212ENST00000533656 MTCL1Q9Y4B5 1905 aaKnown RBP23.04■■□□□ 1.28
VPS51-212ENST00000533656 CCL16O15467 120 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 SOAT2O75908 522 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 FGF19O95750 216 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 CASP14P31944 242 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 MAP3K7CLP57077 242 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 DDR2Q16832 855 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 PKDCCQ504Y2 493 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 TMC5Q6UXY8 1006 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 CNGA4Q8IV77 575 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 SMG7Q92540 1137 aaKnown RBP23.04■■□□□ 1.28
VPS51-212ENST00000533656 RIPOR3Q96MK2 946 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 LRFN3Q9BTN0 628 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 S1PR5Q9H228 398 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 LHX5Q9H2C1 402 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 PIDD1Q9HB75 910 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 ACP6Q9NPH0 428 aa23.04■■□□□ 1.28
VPS51-212ENST00000533656 UXTQ9UBK9 157 aaPredicted RBP23.04■■□□□ 1.28
VPS51-212ENST00000533656 RTN3O95197 1032 aaPredicted RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 ADCY5O95622 1261 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 PTPN2P17706 415 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 SSTR3P32745 418 aaPredicted RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 PRKCIP41743 596 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 MTHFRP42898 656 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 PLA2G4AP47712 749 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 CDR1P51861 262 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 CACNA2D1P54289 1103 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 CDR2Q01850 454 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 TBX2Q13207 712 aaPredicted RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 ARID5BQ14865 1188 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 TAF12Q16514 161 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 PUS10Q3MIT2 529 aaKnown RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 DENND5BQ6ZUT9 1274 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 NOP9Q86U38 636 aaKnown RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 NUP93Q8N1F7 819 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 C12orf76Q8N812 135 aaPredicted RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 ZMIZ2Q8NF64 920 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 STK32AQ8WU08 396 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 CPLX3Q8WVH0 158 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 DDX1Q92499 740 aaKnown RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 TRMT2BQ96GJ1 504 aaKnown RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 NECTIN4Q96NY8 510 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 PDCL3Q9H2J4 239 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 AVENQ9NQS1 362 aaPredicted RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 TMEM30AQ9NV96 361 aa23.03■■□□□ 1.28
VPS51-212ENST00000533656 NOCTQ9UK39 431 aaKnown RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 BZW2Q9Y6E2 419 aaKnown RBP23.03■■□□□ 1.28
VPS51-212ENST00000533656 PTPRDP23468 1912 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 LSM8O95777 96 aaKnown RBP23.02■■□□□ 1.28
VPS51-212ENST00000533656 GPR15P49685 360 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 MRE11P49959 708 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 ARID5AQ03989 594 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 ZP2Q05996 745 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 PDE4CQ08493 712 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 SMAD4Q13485 552 aaKnown RBP23.02■■□□□ 1.28
VPS51-212ENST00000533656 TSR1Q2NL82 804 aaKnown RBP23.02■■□□□ 1.28
VPS51-212ENST00000533656 ATAT1Q5SQI0 421 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 TRIM72Q6ZMU5 477 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 IRF2BP2Q7Z5L9 587 aa23.02■■□□□ 1.28
VPS51-212ENST00000533656 DNAJB7Q7Z6W7 309 aaPredicted RBP23.02■■□□□ 1.28
VPS51-212ENST00000533656 GIPC2Q8TF65 315 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms