RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 KRT34O76011 436 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 ATICP31939 592 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 ALDH5A1P51649 535 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-205ENST00000533464 SNX17Q15036 470 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 PAN2Q504Q3 1202 aaKnown RBP18.25■□□□□ 0.51
PHRF1-205ENST00000533464 BTNL9Q6UXG8 535 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 MAP4K3Q8IVH8 894 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 SETD4Q9NVD3 440 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 FZD1Q9UP38 647 aa18.25■□□□□ 0.51
PHRF1-205ENST00000533464 ANKRD63C9JTQ0 380 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 ADCY3O60266 1144 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 PSMD10O75832 226 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 TGM2P21980 687 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 RARS2Q5T160 578 aaKnown RBP18.24■□□□□ 0.51
PHRF1-205ENST00000533464 LRP10Q7Z4F1 713 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 TMA16Q96EY4 203 aaKnown RBP18.24■□□□□ 0.51
PHRF1-205ENST00000533464 IRAK4Q9NWZ3 460 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 A0A0U1RQJ8 604 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 ERVK-9P63128 1117 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 TWF1Q12792 350 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 SLFN11Q7Z7L1 901 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 KLHL2O95198 593 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 MTBPQ96DY7 904 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 LATS2Q9NRM7 1088 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 SYNPO2Q9UMS6 1093 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 MCF2P10911 925 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 LAMB3Q13751 1172 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 TBCCQ15814 346 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 AP4E1Q9UPM8 1137 aa18.24■□□□□ 0.51
PHRF1-205ENST00000533464 AIM2O14862 343 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 DNAJC8O75937 253 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-205ENST00000533464 IRF1P10914 325 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 FUT2Q10981 343 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 THEMIS2Q5TEJ8 643 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 YIPF3Q9GZM5 350 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 IGF2BP3O00425 579 aaKnown RBP eCLIP18.23■□□□□ 0.51
PHRF1-205ENST00000533464 EPHB6O15197 1021 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 PPP3CAQ08209 521 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 MIIPQ5JXC2 388 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 ZPBP2Q6X784 338 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 PHTF1Q9UMS5 762 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 AURKCQ9UQB9 309 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 GPR182O15218 404 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 ANXA9O76027 345 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 TMCC1O94876 653 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 HMOX2P30519 316 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 CPA2P48052 419 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 CORO7P57737 925 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 LRRC36Q1X8D7 754 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 SHCBP1Q8NEM2 672 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 KAT5Q92993 513 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 DACT3Q96B18 629 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-205ENST00000533464 SGF29Q96ES7 293 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 DCUN1D1Q96GG9 259 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 CASS4Q9NQ75 786 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 WARS2Q9UGM6 360 aaKnown RBP18.23■□□□□ 0.51
PHRF1-205ENST00000533464 CDY2AQ9Y6F7 541 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 CDY1Q9Y6F8 540 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 FBXO47Q5MNV8 452 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 STKLD1Q8NE28 680 aa18.23■□□□□ 0.51
PHRF1-205ENST00000533464 MRPL1Q9BYD6 325 aaKnown RBP18.23■□□□□ 0.51
PHRF1-205ENST00000533464 CXCL11O14625 94 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 ZNF197O14709 1029 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 F9P00740 461 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 STMN1P16949 149 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 LINC00523Q86TU6 105 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 CYP3A7-CYP3A51PA0A087WV96 503 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 FAM153BP0C7A2 387 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 CYP3A7P24462 503 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 FAM153CQ494X1 144 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 RNF180Q86T96 592 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 FAM153AQ9UHL3 310 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 SDR42E2A6NKP2 422 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 RARAP10276 462 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 HARS2P49590 506 aaKnown RBP18.22■□□□□ 0.51
PHRF1-205ENST00000533464 CMTM5Q96DZ9 223 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 KCNK16Q96T55 309 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 GLIS2Q9BZE0 524 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-205ENST00000533464 SNTG2Q9NY99 539 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 ACKR2O00590 384 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 IL10P22301 178 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 EEF1DP29692 281 aaKnown RBP18.22■□□□□ 0.51
PHRF1-205ENST00000533464 NDST1P52848 882 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 DLG4P78352 724 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 PRPF39Q86UA1 669 aaKnown RBP18.22■□□□□ 0.51
PHRF1-205ENST00000533464 MIB1Q86YT6 1006 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 BRSK2Q8IWQ3 736 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 PAFAH2Q99487 392 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 WDR18Q9BV38 432 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 BARX2Q9UMQ3 279 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-205ENST00000533464 PCDHA3Q9Y5H8 950 aa18.22■□□□□ 0.51
PHRF1-205ENST00000533464 SHPRHQ149N8 1683 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 MYO1DO94832 1006 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 SETSIPP0DME0 302 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 CDH8P55286 799 aa18.21■□□□□ 0.51
PHRF1-205ENST00000533464 C6orf10Q5SRN2 563 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms