RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CDC42EP4Q9H3Q1 356 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GIN1Q9NXP7 522 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SUN2Q9UH99 717 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RSL24D1Q9UHA3 163 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SIPA1L3O60292 1781 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 MYH13Q9UKX3 1938 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CHD4Q14839 1912 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 FAM86B1E9PN63 330 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 SPTLC1O15269 473 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CAPN1P07384 714 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 FAM86B2P0C5J1 330 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 UQCRBP14927 111 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 POLR2EP19388 210 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 NCF2P19878 526 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 FLT3P36888 993 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 LBX1P52954 281 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 PTENP60484 403 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ARMCX2Q7L311 632 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 RASAL3Q86YV0 1011 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 IFNL1Q8IU54 200 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC25A41Q8N5S1 370 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ENDOVQ8N8Q3 282 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TERB1Q8NA31 727 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 GIMAP8Q8ND71 665 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 SYN2Q92777 582 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TMEM143Q96AN5 459 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 DHRS1Q96LJ7 313 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TSNARE1Q96NA8 513 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 GCNAQ96QF7 691 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 PDCD2LQ9BRP1 358 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 MRPS26Q9BYN8 205 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 UBR2Q8IWV8 1755 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TAF4O00268 1085 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CCNB1P14635 433 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CXCL17Q6UXB2 119 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ISLR2Q6UXK2 745 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 RSPH3Q86UC2 560 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CLVS1Q8IUQ0 354 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TRIM59Q8IWR1 403 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TPCN2Q8NHX9 752 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 EME1Q96AY2 570 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 DEFB118Q96PH6 123 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 PCIF1Q9H4Z3 704 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CYLDQ9NQC7 956 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 COL20A1Q9P218 1284 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 PCDHB13Q9Y5F0 798 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 COL4A5P29400 1685 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 C15orf38-AP3S2A0A0A6YYH1 394 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TBX10O75333 385 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 EYA4O95677 639 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 NR2F2P24468 414 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 HOXA7P31268 230 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CD97P48960 835 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CYP2J2P51589 502 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ALDH18A1P54886 795 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF200P98182 395 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TNFAIP2Q03169 654 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 KRT17Q04695 432 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ACVR2BQ13705 512 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ODR4Q5SWX8 454 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TTI2Q6NXR4 508 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ARPINQ7Z6K5 226 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 ZBTB33Q86T24 672 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 MKL1Q969V6 931 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 CCDC127Q96BQ5 260 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 GPATCH1Q9BRR8 931 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TMEM106CQ9BVX2 250 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 TXNDC16Q9P2K2 825 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 MAD1L1Q9Y6D9 718 aa7.07□□□□□ -1.28
TGFBR3-209ENST00000532540 BAZ2AQ9UIF9 1905 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 IQANK1A0A1B0GTG1 560 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ZBBXA8MT70 800 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 CFAP99D6REC4 459 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 LAD1O00515 517 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 CLIC2O15247 247 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 GSC2O15499 205 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PABPC4LP0CB38 370 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 KITP10721 976 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PRKAR2AP13861 404 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 GNAZP19086 355 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 NCKAP1LP55160 1127 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PRAMEP78395 509 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 RASA2Q15283 850 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PRPF39Q86UA1 669 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 CYP4X1Q8N118 509 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 SCFD2Q8WU76 684 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 LXNQ9BS40 222 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 KIFC3Q9BVG8 833 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 TRPV6Q9H1D0 765 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 JPH1Q9HDC5 661 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 TELO2Q9Y4R8 837 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 NOTOA8MTQ0 251 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 MSH4O15457 936 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ARHGEF9O43307 516 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 LPXNO60711 386 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 SERPINI2O75830 405 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC25A27O95847 323 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 HSPA8P11142 646 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 CCDC130P13994 396 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms