RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 GAD1Q99259 594 aa15.97■□□□□ 0.15
SRPRA-206ENST00000532259 NOVA2Q9UNW9 492 aaKnown RBP15.97■□□□□ 0.15
SRPRA-206ENST00000532259 LAMA2P24043 3122 aaKnown RBP15.97■□□□□ 0.15
SRPRA-206ENST00000532259 LIASO43766 372 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 RNF8O76064 485 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 KCNE1P15382 129 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 TFE3P19532 575 aaPredicted RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 GNL1P36915 607 aaPredicted RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 RABGGTBP53611 331 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 LILRA4P59901 499 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 GNGT1P63211 74 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 GUCY1A3Q02108 690 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 BYSLQ13895 437 aaKnown RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 XKR4Q5GH76 650 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 HP1BP3Q5SSJ5 553 aaPredicted RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 DENND2CQ68D51 928 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 FOXR1Q6PIV2 292 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 GRK7Q8WTQ7 553 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 UBE2Q2Q8WVN8 375 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 SNF8Q96H20 258 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 ZMYND15Q9H091 742 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 PABPC3Q9H361 631 aaKnown RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 NGRNQ9NPE2 291 aaKnown RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 PSD3Q9NYI0 1048 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 PDCD11Q14690 1871 aaKnown RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 M0QZ92 97 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 CST8O60676 142 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 LCP1P13796 627 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 NR1D1P20393 614 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 YY1P25490 414 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 THPOP40225 353 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 PTK6Q13882 451 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 HADHQ16836 314 aaKnown RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 OSTM1Q86WC4 334 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 NDRG1Q92597 394 aaKnown RBP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 KHSRPQ92945 711 aaKnown RBP eCLIP15.96■□□□□ 0.15
SRPRA-206ENST00000532259 PAAF1Q9BRP4 392 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 CAPS2Q9BXY5 557 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 AAASQ9NRG9 546 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 WDR35Q9P2L0 1181 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 HESX1Q9UBX0 185 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 ANAPC5Q9UJX4 755 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 USP18Q9UMW8 372 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 NEU2Q9Y3R4 380 aa15.96■□□□□ 0.15
SRPRA-206ENST00000532259 CAND2O75155 1236 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 TKTP29401 623 aaKnown RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 NRLP54845 237 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 MTM1Q13496 603 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 P3H1Q32P28 736 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 LRRC38Q5VT99 294 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 LRIG3Q6UXM1 1119 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 SERINC5Q86VE9 423 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 SLC2A14Q8TDB8 520 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 SLC35F5Q8WV83 523 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 ADAM33Q9BZ11 813 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 SENP6Q9GZR1 1112 aaPredicted RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 SNX25Q9H3E2 840 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 TRMT13Q9NUP7 481 aaKnown RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 TIMM13Q9Y5L4 95 aaPredicted RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 TRPV2Q9Y5S1 764 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 CLDN5O00501 218 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 PAPSS1O43252 624 aaPredicted RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 MGEA5O60502 916 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 MAP3K6O95382 1288 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 GPD1P21695 349 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 KDELR1P24390 212 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 IZUMO3Q5VZ72 239 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 OLFML1Q6UWY5 402 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 LEKR1Q6ZMV7 388 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 CYP4V2Q6ZWL3 525 aaPredicted RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 APPL2Q8NEU8 664 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 EPS8L3Q8TE67 593 aaKnown RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 LRRN4Q8WUT4 740 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 SLCO2A1Q92959 643 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 UPF3AQ9H1J1 476 aaKnown RBP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.95■□□□□ 0.14
SRPRA-206ENST00000532259 FAM105AQ9NUU6 356 aa15.95■□□□□ 0.14
SRPRA-206ENST00000532259 C2CD4BA6NLJ0 364 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 SGK1O00141 431 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 CD4P01730 458 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 GHRP10912 638 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 CD52P31358 61 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 TAF6P49848 677 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 ATXN1P54253 815 aaKnown RBP15.94■□□□□ 0.14
SRPRA-206ENST00000532259 MAGOHP61326 146 aaKnown RBP15.94■□□□□ 0.14
SRPRA-206ENST00000532259 ZSCAN26Q16670 478 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 RFX6Q8HWS3 928 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 ACTL9Q8TC94 416 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 FNIP1Q8TF40 1166 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 PPP1R10Q96QC0 940 aaKnown RBP15.94■□□□□ 0.14
SRPRA-206ENST00000532259 MAGEB5Q9BZ81 275 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 CDC42EP4Q9H3Q1 356 aaKnown RBP15.94■□□□□ 0.14
SRPRA-206ENST00000532259 SPC25Q9HBM1 224 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 DDX56Q9NY93 547 aaKnown RBP15.94■□□□□ 0.14
SRPRA-206ENST00000532259 KRT7P08729 469 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 ACTN2P35609 894 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 ARSEP51690 589 aa15.94■□□□□ 0.14
SRPRA-206ENST00000532259 GSCP56915 257 aaPredicted RBP15.94■□□□□ 0.14
SRPRA-206ENST00000532259 OTUD4Q01804 1114 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms