RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 ACBD6Q9BR61 282 aa11.32□□□□□ -0.6
CHEK1-212ENST00000531607 LINC00597Q9H2U6 94 aa11.32□□□□□ -0.6
CHEK1-212ENST00000531607 GCNT4Q9P109 453 aa11.32□□□□□ -0.6
CHEK1-212ENST00000531607 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
CHEK1-212ENST00000531607 KLK13Q9UKR3 277 aa11.32□□□□□ -0.6
CHEK1-212ENST00000531607 ARHGAP26Q9UNA1 814 aa11.32□□□□□ -0.6
CHEK1-212ENST00000531607 AGAP1Q9UPQ3 857 aa11.32□□□□□ -0.6
CHEK1-212ENST00000531607 TNFRSF10BO14763 440 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 SLC26A4O43511 780 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 HCRTO43612 131 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 EIF5BO60841 1220 aaKnown RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 CYP17A1P05093 508 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 TCF3P15923 654 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 PLCG1P19174 1290 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 P2RY2P41231 377 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 PTGER3P43115 390 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 ATXN3P54252 364 aaPredicted RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 SIM1P81133 766 aaPredicted RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 MRPS21P82921 87 aaKnown RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 MCM6Q14566 821 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 CFAP221Q4G0U5 840 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 LYSMD4Q5XG99 296 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 ARL6IP4Q66PJ3 421 aaKnown RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 LRSAM1Q6UWE0 723 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 CRELD2Q6UXH1 353 aaPredicted RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 FILIP1Q7Z7B0 1213 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 SYT12Q8IV01 421 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 TMEM86AQ8N2M4 240 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 HDDC3Q8N4P3 179 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 TXNDC5Q8NBS9 432 aaKnown RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 OLIG1Q8TAK6 271 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 SPATA18Q8TC71 538 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 HMGB4Q8WW32 186 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 AK8Q96MA6 479 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 FNBP1Q96RU3 617 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 FIZ1Q96SL8 496 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 FAM213AQ9BRX8 229 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 GTPBP2Q9BX10 602 aaKnown RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 IKZF4Q9H2S9 585 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 POLMQ9NP87 494 aaPredicted RBP11.31□□□□□ -0.6
CHEK1-212ENST00000531607 BLOC1S4Q9NUP1 217 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 SNX9Q9Y5X1 595 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 CELSR3Q9NYQ7 3312 aa11.31□□□□□ -0.6
CHEK1-212ENST00000531607 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 SMG1Q96Q15 3661 aaKnown RBP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 MYMKA6NI61 221 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 SGK1O00141 431 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 LEFTY2O00292 366 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 SCAMP3O14828 347 aaKnown RBP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 KRT19P08727 400 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 HNRNPLP14866 589 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 PCSK1P29120 753 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 TIE1P35590 1138 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 DPP6P42658 865 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 WNT7BP56706 349 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 POU5F1Q01860 360 aaKnown RBP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 KDSRQ06136 332 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 RESTQ13127 1097 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 GAB4Q2WGN9 574 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 C4orf50Q6ZRC1 276 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 OSTM1Q86WC4 334 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 SFTPA1Q8IWL2 248 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 PGBD3Q8N328 593 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 LRRC52Q8N7C0 313 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 FRMD1Q8N878 549 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 C1orf127Q8N9H9 656 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 RAD54LQ92698 747 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 HVCN1Q96D96 273 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 ZDHHC4Q9NPG8 344 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 FSCN3Q9NQT6 498 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 TMEM74BQ9NUR3 256 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 RBAKQ9NYW8 714 aaPredicted RBP11.3□□□□□ -0.6
CHEK1-212ENST00000531607 ITGA11Q9UKX5 1188 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 MSRB2Q9Y3D2 182 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 STYXL1Q9Y6J8 313 aa11.3□□□□□ -0.6
CHEK1-212ENST00000531607 ACACAQ13085 2346 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 TCRBV21S2A2A0A5A6 115 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 KAT7O95251 611 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 APODP05090 189 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 ITPKAP23677 461 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 ANXA13P27216 316 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 ADSSP30520 456 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 RDXP35241 583 aaKnown RBP11.29□□□□□ -0.6
CHEK1-212ENST00000531607 DDIT3P35638 169 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 MAGEA11P43364 429 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 LHX1P48742 406 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 PSMC1P62191 440 aaKnown RBP11.29□□□□□ -0.6
CHEK1-212ENST00000531607 ZXDBP98169 803 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 SEMA3BQ13214 749 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 POSTNQ15063 836 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 EOGTQ5NDL2 527 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 SLC23A3Q6PIS1 610 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 SFR1Q86XK3 245 aa11.29□□□□□ -0.6
CHEK1-212ENST00000531607 BRSK2Q8IWQ3 736 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms