RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CPA6Q8N4T0 437 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 TTC16Q8NEE8 873 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 OLIG1Q8TAK6 271 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 SH3RF2Q8TEC5 729 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 KBTBD7Q8WVZ9 684 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 LARP4BQ92615 738 aaKnown RBP9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 SAAL1Q96ER3 474 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 ACBD6Q9BR61 282 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 TMEM206Q9H813 350 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 TRPC7Q9HCX4 862 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 ABCB6Q9NP58 842 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 TMEM30AQ9NV96 361 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 SIX4Q9UIU6 781 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 ZDHHC9Q9Y397 364 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 GPSM3Q9Y4H4 160 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 GABRDO14764 452 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 SCAMP3O14828 347 aaKnown RBP9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 SLC26A4O43511 780 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 TBCAO75347 108 aaKnown RBP9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 RHOBTB1O94844 696 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 CYP17A1P05093 508 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 USP17L7P0C7H9 530 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 TCF3P15923 654 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 GBP1P32455 592 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 UBA7P41226 1012 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 SEC13P55735 322 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 IRX4P78413 519 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 TSPY1Q01534 308 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 POU5F1Q01860 360 aaKnown RBP9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 PSMD2Q13200 908 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 ELF2Q15723 593 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 NFE2Q16621 373 aaPredicted RBP9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 SOWAHAQ2M3V2 549 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 SLFN12LQ6IEE8 588 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 FAM171BQ6P995 826 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 C12orf40Q86WS4 652 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 BRSK2Q8IWQ3 736 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 TSTD1Q8NFU3 115 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 RLN3Q8WXF3 142 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 POMGNT1Q8WZA1 660 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 ATP2A3Q93084 1043 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 ACDQ96AP0 544 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 DNAJC19Q96DA6 116 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 CALML4Q96GE6 196 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 EPSTI1Q96J88 318 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 CNOT6LQ96LI5 555 aaKnown RBP9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 ZNF560Q96MR9 790 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 FNBP1Q96RU3 617 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 FAM213AQ9BRX8 229 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 ZDHHC4Q9NPG8 344 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 CRTAC1Q9NQ79 661 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 TMEM74BQ9NUR3 256 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 GDAP2Q9NXN4 497 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 ARHGAP26Q9UNA1 814 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 AGAP1Q9UPQ3 857 aa9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.86□□□□□ -0.83
CHMP4A-205ENST00000531158 APC2O95996 2303 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 TMEM131Q92545 1883 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 TRAV19A0A0A6YYK7 116 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 GOLGA8IPA6NC78 632 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 GOLGA8JA6NMD2 632 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 SGK1O00141 431 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 IL18RAPO95256 599 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 OLFM2O95897 454 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 KRT18P05783 430 aaKnown RBP9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 LMO2P25791 158 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 GJB2P29033 226 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 PNPLA4P41247 253 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 PTGER3P43115 390 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 SLC6A11P48066 632 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 IFNAR2P48551 515 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 CACNA2D1P54289 1103 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 PSMC1P62191 440 aaKnown RBP9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 RPL10AP62906 217 aaKnown RBP9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 TFAMQ00059 246 aaKnown RBP9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 AMPD2Q01433 879 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 C19orf57Q0VDD7 668 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 CCDC173Q0VFZ6 552 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 PKP1Q13835 747 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 CRY1Q16526 586 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 LMBRD2Q68DH5 695 aaPredicted RBP9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 KIAA1211LQ6NV74 962 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 DYMQ7RTS9 669 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 NT5DC4Q86YG4 428 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 CCDC33Q8N5R6 958 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 LRRC52Q8N7C0 313 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 OR5B17Q8NGF7 314 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 CBWD1Q9BRT8 395 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 MTMR12Q9C0I1 747 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 RNF38Q9H0F5 515 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 PDE11AQ9HCR9 933 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 TMEM9BQ9NQ34 198 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 TBC1D7Q9P0N9 293 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 UXTQ9UBK9 157 aaPredicted RBP9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 MBD1Q9UIS9 605 aaPredicted RBP9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 MMP17Q9ULZ9 603 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 SNX9Q9Y5X1 595 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 ACACAQ13085 2346 aa9.85□□□□□ -0.83
CHMP4A-205ENST00000531158 MYMKA6NI61 221 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms