RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 PRMT2P55345 433 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 MBTPS1Q14703 1052 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 ARHGEF6Q15052 776 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 TAF5Q15542 800 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 UPP1Q16831 310 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 HADHQ16836 314 aaKnown RBP16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 SMTNL2Q2TAL5 461 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 SCUBE3Q8IX30 993 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 RXFP2Q8WXD0 754 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 KHSRPQ92945 711 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 CNPY3Q9BT09 278 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 B3GNT5Q9BYG0 378 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 ZWILCHQ9H900 591 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 ZDHHC18Q9NUE0 388 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 ASNSD1Q9NWL6 643 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 SNX24Q9Y343 169 aa16.23■□□□□ 0.19
CCDC90B-213ENST00000529611 hCG_1818297A0A087WSY0 165 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 C3orf70A6NLC5 250 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 RNF8O76064 485 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 SYF2O95926 243 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 PDGFRAP16234 1089 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 ACAT1P24752 427 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 MIPP30301 263 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 RPL9P32969 192 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 GGCXP38435 758 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 CDKN2BP42772 138 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 RPL21P46778 160 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 SLC6A3Q01959 620 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 KCNT1Q5JUK3 1230 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 ZNF784Q8NCA9 323 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 MED4Q9NPJ6 270 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 HOMER3Q9NSC5 361 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 GRHL1Q9NZI5 618 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 POMCP01189 267 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 PTPN1P18031 435 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 PCK1P35558 622 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 SNX16P57768 344 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 CCNG2Q16589 344 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 ODF2Q5BJF6 829 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 TFDP3Q5H9I0 405 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 SH3PXD2AQ5TCZ1 1133 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 KIAA0319Q5VV43 1072 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 KAZNQ674X7 775 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 ZNF598Q86UK7 904 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 ECHDC2Q86YB7 292 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 ZDHHC17Q8IUH5 632 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 FUKQ8N0W3 1084 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 PGBD4Q96DM1 585 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 HNRNPABQ99729 332 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 FAM118BQ9BPY3 351 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 CYLDQ9NQC7 956 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 PCSK1NQ9UHG2 260 aa16.22■□□□□ 0.19
CCDC90B-213ENST00000529611 TJP3O95049 919 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 SKIP12755 728 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 KRT17Q04695 432 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 C15orf59Q2T9L4 293 aaPredicted RBP16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 CCDC14Q49A88 953 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 HSP90B2PQ58FF3 399 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 ALS2CLQ60I27 953 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 ZDHHC24Q6UX98 284 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 TMEM86AQ8N2M4 240 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 RIN2Q8WYP3 895 aaPredicted RBP16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 FMO2Q99518 471 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 UBN1Q9NPG3 1134 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 SAGE1Q9NXZ1 904 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 DDX43Q9NXZ2 648 aaKnown RBP16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 USP18Q9UMW8 372 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 PHF24Q9UPV7 400 aa16.21■□□□□ 0.19
CCDC90B-213ENST00000529611 TDRD15B5MCY1 1934 aaKnown RBP16.21■□□□□ 0.18
CCDC90B-213ENST00000529611 ARVCFO00192 962 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 DPYSL4O14531 572 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 POLR3GO15318 223 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 TRUB2O95900 331 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 PLTPP55058 493 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 FAM193AP78312 1265 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 GRIK3Q13003 919 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 PPP1R7Q15435 360 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 RAB6CQ53S08 254 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 DSTYKQ6XUX3 929 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 PAQR9Q6ZVX9 377 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 CYP4V2Q6ZWL3 525 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 RTN4RL1Q86UN2 441 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 IQCKQ8N0W5 287 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 ATL2Q8NHH9 583 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 FAM71BQ8TC56 605 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 FBXO25Q8TCJ0 367 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 SH3TC2Q8TF17 1288 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 GRK7Q8WTQ7 553 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 CLEC4CQ8WTT0 213 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 PIK3R5Q8WYR1 880 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 HSFY1Q96LI6 401 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 PEBP4Q96S96 227 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 RAB6CQ9H0N0 254 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 INPP5FQ9Y2H2 1132 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 TRIM17Q9Y577 477 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 TIMM13Q9Y5L4 95 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 CLDN5O00501 218 aa16.2■□□□□ 0.18
CCDC90B-213ENST00000529611 XPO1O14980 1071 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms