RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	MCF2L	O15068	1137 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	LGR5	O75473	907 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	TRUB2	O95900	331 aa	Known RBP	24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	ERBB2	P04626	1255 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	CD48	P09326	243 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	TROVE2	P10155	538 aa	Known RBP eCLIP	24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	DPYSL3	Q14195	570 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	SEPT7	Q16181	437 aa	Known RBP	24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	ZNF667	Q5HYK9	610 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	NLRP9	Q7RTR0	991 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	TCP10L	Q8TDR4	215 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	CYTH2	Q99418	400 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	RSAD1	Q9HA92	442 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	NXF1	Q9UBU9	619 aa	Known RBP	24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	LNPEP	Q9UIQ6	1025 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	ZBTB42	B2RXF5	422 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	DIAPH2	O60879	1101 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	ENDOD1	O94919	500 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	MIP	P30301	263 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	STIP1	P31948	543 aa	Known RBP	24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	BBS9	Q3SYG4	887 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	ATF7IP2	Q5U623	682 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	PRAMEF18	Q5VWM3	479 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	TLE6	Q9H808	572 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	LRRC37A2	A6NM11	1700 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	RNF8	O76064	485 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	PCK1	P35558	622 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	WDR78	Q5VTH9	848 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	EMC1	Q8N766	993 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	SH3TC2	Q8TF17	1288 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	SGIP1	Q9BQI5	828 aa		24.47	■■□□□ 1.51
GSDMD-208	ENST00000528475	SPAG6	O75602	509 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	RBP3	P10745	1247 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	RAP1GAP	P47736	663 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	ANGEL2	Q5VTE6	544 aa	Known RBP	24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	CHSY1	Q86X52	802 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	FAM71D	Q8N9W8	422 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	SLC4A11	Q8NBS3	891 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	ADAM33	Q9BZ11	813 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	SYNC	Q9H7C4	482 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	ASNSD1	Q9NWL6	643 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	SIX4	Q9UIU6	781 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	ZFP69B	Q9UJL9	534 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	USP18	Q9UMW8	372 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	BRCA1	P38398	1863 aa	Known RBP	24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	IQANK1	A0A1B0GTG1	560 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475		E7ENQ6	273 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	DHRS4L1	P0CG22	281 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	PTPN11	Q06124	597 aa	Predicted RBP	24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	NOMO1	Q15155	1222 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	PLPPR4	Q7Z2D5	763 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	MIEF2	Q96C03	454 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	TBC1D10A	Q9BXI6	508 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	SDCBP2	Q9H190	292 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	SLC5A4	Q9NY91	659 aa		24.46	■■□□□ 1.51
GSDMD-208	ENST00000528475	PTPN4	P29074	926 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	TAF1B	Q53T94	588 aa	Predicted RBP	24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	WASHC2D	Q5SRD0	308 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	LRRC71	Q8N4P6	559 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	FAM13C	Q8NE31	585 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	ZNF570	Q96NI8	536 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	MANSC1	Q9H8J5	431 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	RNPEPL1	Q9HAU8	725 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	NPHS2	Q9NP85	383 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	PCSK1N	Q9UHG2	260 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	TNFSF13B	Q9Y275	285 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	GJA3	Q9Y6H8	435 aa		24.45	■■□□□ 1.5
GSDMD-208	ENST00000528475	MICAL2	O94851	1124 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	SLC18A2	Q05940	514 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	CTC1	Q2NKJ3	1217 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	PLEKHG4	Q58EX7	1191 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	SPATA18	Q8TC71	538 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	SLC44A1	Q8WWI5	657 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	GPR20	Q99678	358 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	RPF1	Q9H9Y2	349 aa	Known RBP	24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	BTBD7	Q9P203	1132 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	KANSL3	Q9P2N6	904 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	TEX264	Q9Y6I9	313 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	FZD9	O00144	591 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	CILP	O75339	1184 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	FAM155B	O75949	473 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	IL1B	P01584	269 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	MT-ND3	P03897	115 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	NEK3	P51956	506 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	BASP1	P80723	227 aa	Known RBP	24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	ROR1	Q01973	937 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	KCNJ11	Q14654	390 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	EEF1DP3	Q658K8	133 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	CLNK	Q7Z7G1	428 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	CEP120	Q8N960	986 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	CDT1	Q9H211	546 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	VRTN	Q9H8Y1	702 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	CYP3A43	Q9HB55	503 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	PNPLA8	Q9NP80	782 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	SLC17A7	Q9P2U7	560 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	PPP2R3B	Q9Y5P8	575 aa		24.44	■■□□□ 1.5
GSDMD-208	ENST00000528475	KIF1C	O43896	1103 aa	Known RBP	24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	PEX11A	O75192	247 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	TGDS	O95455	350 aa		24.43	■■□□□ 1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms