RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TEKT4Q8WW24 435 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 ATG4AQ8WYN0 398 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 ZNF148Q9UQR1 794 aa15.51■□□□□ 0.07
ECHDC1-220ENST00000528402 ZNF487B1APH4 448 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 E5RJQ4 531 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 PI4K2BG5E9Z4 385 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 ENDOD1O94919 500 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 SKIP12755 728 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 KLRC2P26717 231 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 MIPP30301 263 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 RPL9P32969 192 aaKnown RBP15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 NOGQ13253 232 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 TFDP2Q14188 446 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 GLRA4Q5JXX5 417 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 KAZNQ674X7 775 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 FAM183BPQ6ZVS7 135 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 MRPL10Q7Z7H8 261 aaKnown RBP15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 TMEM86AQ8N2M4 240 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 ALLCQ8N6M5 410 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 ARFGAP1Q8N6T3 406 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 SPATA18Q8TC71 538 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 RXFP2Q8WXD0 754 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 PGM2Q96G03 612 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 PPP1R10Q96QC0 940 aaKnown RBP15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 MAK16Q9BXY0 300 aaKnown RBP15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 TJP2Q9UDY2 1190 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 ST3GAL5Q9UNP4 418 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 SQORQ9Y6N5 450 aa15.5■□□□□ 0.07
ECHDC1-220ENST00000528402 MYADML2A6NDP7 307 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 PPEF2O14830 753 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 PRPSAP2O60256 369 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 ZNF623O75123 536 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 ADAMTS4O75173 837 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 KRT10P13645 584 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 NR1D1P20393 614 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 SDC4P31431 198 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 ITGA8P53708 1063 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 LILRA4P59901 499 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 KRT71Q3SY84 523 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 PMF1Q6P1K2 205 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 OLFML1Q6UWY5 402 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 CXCL17Q6UXB2 119 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 TTC30AQ86WT1 665 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 EMC1Q8N766 993 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 C12orf29Q8N999 325 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 KLHDC9Q8NEP7 349 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 SLC35B2Q8TB61 432 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 KBTBD7Q8WVZ9 684 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 HNRNPABQ99729 332 aaKnown RBP15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 SENP6Q9GZR1 1112 aaPredicted RBP15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 ZWILCHQ9H900 591 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 PRDM16Q9HAZ2 1276 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 PCDH9Q9HC56 1237 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 UBN1Q9NPG3 1134 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 XPNPEP3Q9NQH7 507 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 FAM105AQ9NUU6 356 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 CWC15Q9P013 229 aaKnown RBP15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 KLK14Q9P0G3 267 aa15.49■□□□□ 0.07
ECHDC1-220ENST00000528402 APOC4-APOC2K7ER74 178 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 RIPK2O43353 540 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 CAND2O75155 1236 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 APOC2P02655 101 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 THP07101 528 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 TCF4P15884 667 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 IL1R2P27930 398 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 STIP1P31948 543 aaKnown RBP15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 PTPN9P43378 593 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 LHX1P48742 406 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 PDE4CQ08493 712 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 MGAT3Q09327 533 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 SLC29A2Q14542 456 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 LLGL1Q15334 1064 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 OASLQ15646 514 aaKnown RBP15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 EFHC1Q5JVL4 640 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 GDF6Q6KF10 455 aaPredicted RBP15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 HIBCHQ6NVY1 386 aaPredicted RBP15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 FAM43BQ6ZT52 329 aaPredicted RBP15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 SLC26A9Q7LBE3 791 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 ANKS1BQ7Z6G8 1248 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 ADGRF2Q8IZF7 708 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 CCDC77Q9BR77 488 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 PHACTR1Q9C0D0 580 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 CXCL16Q9H2A7 254 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 TSPYL2Q9H2G4 693 aaPredicted RBP15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 CNOT10Q9H9A5 744 aaKnown RBP15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 DNPEPQ9ULA0 475 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 GABRQQ9UN88 632 aa15.48■□□□□ 0.07
ECHDC1-220ENST00000528402 DNALI1O14645 258 aaPredicted RBP15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 XPO1O14980 1071 aaKnown RBP15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 CST8O60676 142 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 TOMM70O94826 608 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 TTC4O95801 387 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 PGK1P00558 417 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 ATP5DP30049 168 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 IRAK1P51617 712 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 PLCB3Q01970 1234 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 SP3Q02447 781 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 CACNB2Q08289 660 aaPredicted RBP15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 PTK7Q13308 1070 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms