RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 PRAMEF18Q5VWM3 479 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 APOBEC3HQ6NTF7 200 aaKnown RBP7.5□□□□□ -1.21
CTNND1-218ENST00000528232 LONP2Q86WA8 852 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 SKA1Q96BD8 255 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 C9orf72Q96LT7 481 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 DDX50Q9BQ39 737 aaKnown RBP7.5□□□□□ -1.21
CTNND1-218ENST00000528232 PDCD2LQ9BRP1 358 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 PABPC3Q9H361 631 aaKnown RBP7.5□□□□□ -1.21
CTNND1-218ENST00000528232 ANKZF1Q9H8Y5 726 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 DPP3Q9NY33 737 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 EURLQ9NYK6 297 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 BCL9LQ86UU0 1499 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 C3orf70A6NLC5 250 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-218ENST00000528232 NFIBO00712 420 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 CST8O60676 142 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 AP1G2O75843 785 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 MOCS2O96007 188 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-218ENST00000528232 ITGB3P05106 788 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 ITGA4P13612 1032 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 GRIK1P39086 918 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 CPT1AP50416 773 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 SLC26A2P50443 739 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 MTTPP55157 894 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 PSMC6P62333 389 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 ANO4Q32M45 955 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 CYP4A22Q5TCH4 519 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 OTOP1Q7RTM1 612 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 PACS2Q86VP3 889 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 SPATA18Q8TC71 538 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 MKL1Q969V6 931 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 MTBPQ96DY7 904 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 CCT7Q99832 543 aa7.5□□□□□ -1.21
CTNND1-218ENST00000528232 LRRC10BA6NIK2 292 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 SAC3D1A6NKF1 404 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 FAM86B1E9PN63 330 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 APRTP07741 180 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 FAM86B2P0C5J1 330 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 CYP2C9P11712 490 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 PRAMEP78395 509 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 NSUN2Q08J23 767 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTNND1-218ENST00000528232 EPC2Q52LR7 807 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 ZC3H12BQ5HYM0 836 aaKnown RBP7.49□□□□□ -1.21
CTNND1-218ENST00000528232 DACT2Q5SW24 774 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 RNF217Q8TC41 542 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 ZBED2Q9BTP6 218 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 SIK2Q9H0K1 926 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 FANCEQ9HB96 536 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TMBIM4Q9HC24 238 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 EMC3Q9P0I2 261 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 L3MBTL1Q9Y468 752 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TMEM120BA0PK00 339 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TMEM247A6NEH6 219 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 GOLGA8TH3BQL2 631 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 GOLGA8RI6L899 631 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 SLITRK3O94933 977 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 FGRP09769 529 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 VDRP11473 427 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 KCNA2P16389 499 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 DSG3P32926 999 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 GEMIN4P57678 1058 aaKnown RBP7.49□□□□□ -1.21
CTNND1-218ENST00000528232 KRT72Q14CN4 511 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TAF1CQ15572 869 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-218ENST00000528232 FKBP1CQ5VVH2 108 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 RINLQ6ZS11 566 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 GPR141Q7Z602 305 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 ATPAF2Q8N5M1 289 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 CCNYL1Q8N7R7 359 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 UBA3Q8TBC4 463 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 NCLNQ969V3 563 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TRIM8Q9BZR9 551 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 NEUROG2Q9H2A3 272 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 RANBP17Q9H2T7 1088 aaKnown RBP7.49□□□□□ -1.21
CTNND1-218ENST00000528232 MROH8Q9H579 483 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 UBQLN1Q9UMX0 589 aaKnown RBP7.49□□□□□ -1.21
CTNND1-218ENST00000528232 L1RE1Q9UN81 338 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 SMIM31A0A1B0GVY4 71 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 ATP6V1G2O95670 118 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 CPB1P15086 417 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TTKP33981 857 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 GNL1P36915 607 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TAF6P49848 677 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 DAB2P98082 770 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 SLC29A2Q14542 456 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 ZNF235Q14590 738 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 KYNUQ16719 465 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 UGP2Q16851 508 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 BOLA3Q53S33 107 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TRIM74Q86UV6 250 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 TRIM73Q86UV7 250 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 SPEF2Q9C093 1822 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 CCL15-CCL14A0A0B4J2E2 113 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 MTSS1O43312 755 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 ATP9BO43861 1147 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 PDGFRBP09619 1106 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 PCSK1P29120 753 aa7.49□□□□□ -1.21
CTNND1-218ENST00000528232 KCNJ1P48048 391 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms