RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 CYP2F1P24903 491 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 PRPHP41219 470 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 LIG4P49917 911 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 ANAPC15P60006 121 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 ZNF33AQ06730 810 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 SLC36A4Q6YBV0 504 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 OR2I1PQ8NGU4 316 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 MDM1Q8TC05 714 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 SPATA18Q8TC71 538 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 KCNV2Q8TDN2 545 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 FUBP3Q96I24 572 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 CEP295NLQ96MC4 621 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 CAMK1GQ96NX5 476 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 FIZ1Q96SL8 496 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 PNKPQ96T60 521 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 GTPBP2Q9BX10 602 aaKnown RBP17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 TRPC7Q9HCX4 862 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 STYXL1Q9Y6J8 313 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 HDCP19113 662 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 MATR3P43243 847 aaKnown RBP eCLIP17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 TNFRSF4P43489 277 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 PDE6CP51160 858 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 ZNF131P52739 623 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 FOSBP53539 338 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 SLC7A9P82251 487 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 TSPY1Q01534 308 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 DHCR24Q15392 516 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 ARSHQ5FYA8 562 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 INTS6LQ5JSJ4 861 aaKnown RBP17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 EMC10Q5UCC4 262 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 TOGARAM2Q6ZUX3 1019 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 C12orf40Q86WS4 652 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 SLC41A1Q8IVJ1 513 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 PDCL2Q8N4E4 241 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 CXorf38Q8TB03 319 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 HNRNPLLQ8WVV9 542 aaKnown RBP17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 HMGB4Q8WW32 186 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 PNMA5Q96PV4 448 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 DPP3Q9NY33 737 aa17.45■□□□□ 0.38
CHMP4A-203ENST00000527154 MYH11P35749 1972 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 IGHV1OR15-9A0A0B4J2B8 117 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 LEFTY2O00292 366 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 LAD1O00515 517 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 SYPP08247 313 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 TIE1P35590 1138 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 GRIA2P42262 883 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 MAGEA11P43364 429 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 SLC6A11P48066 632 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 RAD51AP2Q09MP3 1159 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 KCNB1Q14721 858 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 SV2CQ496J9 727 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 RHBDF2Q6PJF5 856 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 TMPRSS7Q7RTY8 843 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 SLCO6A1Q86UG4 719 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 NAXDQ8IW45 347 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 ETFBKMTQ8IXQ9 262 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 BAHD1Q8TBE0 780 aaPredicted RBP17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 BICD1Q96G01 975 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 DUSP9Q99956 384 aaKnown RBP17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 MSTO1Q9BUK6 570 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 HCN2Q9UL51 889 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 ODF2LQ9ULJ1 636 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 MYO18AQ92614 2054 aaKnown RBP17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 PTPRBP23467 1997 aa17.44■□□□□ 0.38
CHMP4A-203ENST00000527154 TCRBV21S2A2A0A5A6 115 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 MYMKA6NI61 221 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 GABRDO14764 452 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 C1QL1O75973 258 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 SEC24BO95487 1268 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 GABRG2P18507 467 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 GUCY1B3Q02153 619 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 RPL6Q02878 288 aaKnown RBP17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 FAM171BQ6P995 826 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 DBX2Q6ZNG2 339 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 FILIP1Q7Z7B0 1213 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 NT5DC4Q86YG4 428 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 SCUBE3Q8IX30 993 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 FBXO18Q8NFZ0 1043 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 ZNF419Q96HQ0 510 aaPredicted RBP17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 SPATA17Q96L03 361 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 TTLL2Q9BWV7 592 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 TOR4AQ9NXH8 423 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 PCOLCE2Q9UKZ9 415 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 L1RE1Q9UN81 338 aa17.43■□□□□ 0.38
CHMP4A-203ENST00000527154 CFAP46Q8IYW2 2715 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 A0A1W2PQF6 199 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 TK2O00142 265 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 APODP05090 189 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 PNPLA4P41247 253 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 CAMK2BQ13554 666 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 CCDC142Q17RM4 750 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 CRELD2Q6UXH1 353 aaPredicted RBP17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 LIMS2Q7Z4I7 341 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 TTC30AQ86WT1 665 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 TMEM86AQ8N2M4 240 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 PNPLA1Q8N8W4 532 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 FAM212AQ96EL1 285 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 LRIG1Q96JA1 1093 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms