RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ANO7Q6IWH7 933 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 DENND5BQ6ZUT9 1274 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 ADGRG2Q8IZP9 1017 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 GPD1LQ8N335 351 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 KIAA1958Q8N8K9 716 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 KBTBD7Q8WVZ9 684 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 HPDLQ96IR7 371 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 CNOT6LQ96LI5 555 aaKnown RBP17.22■□□□□ 0.35
PTPRU-210ENST00000527027 INTS13Q9NVM9 706 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 MMP17Q9ULZ9 603 aa17.22■□□□□ 0.35
PTPRU-210ENST00000527027 OBSL1O75147 1896 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 FRMD3A2A2Y4 597 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 ANTXRLA6NF34 631 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 KIAA0391O15091 583 aaKnown RBP17.21■□□□□ 0.35
PTPRU-210ENST00000527027 PDGFRBP09619 1106 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 BCKDHBP21953 392 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 USP46P62068 366 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 PSMC1P62191 440 aaKnown RBP17.21■□□□□ 0.35
PTPRU-210ENST00000527027 SLC7A9P82251 487 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 MRPS21P82921 87 aaKnown RBP17.21■□□□□ 0.35
PTPRU-210ENST00000527027 SURF1Q15526 300 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 CRY1Q16526 586 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 SH3PXD2AQ5TCZ1 1133 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 LMBRD2Q68DH5 695 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-210ENST00000527027 CYP2U1Q7Z449 544 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 CCDC33Q8N5R6 958 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 MYLPFQ96A32 169 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 CLIC6Q96NY7 704 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 TTLL2Q9BWV7 592 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 FGFBP2Q9BYJ0 223 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 TMEM9BQ9NQ34 198 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 CRTAC1Q9NQ79 661 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 PANK4Q9NVE7 773 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 ABCA7Q8IZY2 2146 aa17.21■□□□□ 0.35
PTPRU-210ENST00000527027 ZNF840PA6NDX5 716 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 CDX4O14627 284 aaPredicted RBP17.2■□□□□ 0.34
PTPRU-210ENST00000527027 ALDH1A2O94788 518 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 PRPF6O94906 941 aaKnown RBP17.2■□□□□ 0.34
PTPRU-210ENST00000527027 TNNC2P02585 160 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 CEACAM1P13688 526 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 CSRP1P21291 193 aaKnown RBP17.2■□□□□ 0.34
PTPRU-210ENST00000527027 ANXA13P27216 316 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 PPP3CCP48454 512 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 DHPSP49366 369 aaPredicted RBP17.2■□□□□ 0.34
PTPRU-210ENST00000527027 CYP27A1Q02318 531 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 ZNF252P-AS1Q0IIN9 211 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 FILIP1Q7Z7B0 1213 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 MDGA1Q8NFP4 955 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 RNF38Q9H0F5 515 aa17.2■□□□□ 0.34
PTPRU-210ENST00000527027 VPS37CA5D8V6 355 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-210ENST00000527027 C1QTNF9BB2RNN3 333 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 PATE3B3GLJ2 98 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 SLC9A3R1O14745 358 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-210ENST00000527027 TRIM66O15016 1216 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 CYP17A1P05093 508 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 C1QTNF9P0C862 333 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 WARSP23381 471 aaKnown RBP17.19■□□□□ 0.34
PTPRU-210ENST00000527027 NOP14P78316 857 aaKnown RBP17.19■□□□□ 0.34
PTPRU-210ENST00000527027 IRX4P78413 519 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 FOXC1Q12948 553 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 DHCR24Q15392 516 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 UNQ6494/PRO21346Q6UXR6 183 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 TMEM92Q6UXU6 159 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 TTC30AQ86WT1 665 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 OLIG1Q8TAK6 271 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 PIGKQ92643 395 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 PCED1BQ96HM7 432 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 PNKPQ96T60 521 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 MMS19Q96T76 1030 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 WASF3Q9UPY6 502 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 PTPRJQ12913 1337 aa17.19■□□□□ 0.34
PTPRU-210ENST00000527027 A0A0A0MRY4 1105 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 OLFM2O95897 454 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTPRU-210ENST00000527027 GNL1P36915 607 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-210ENST00000527027 EIF2DP41214 584 aaKnown RBP17.18■□□□□ 0.34
PTPRU-210ENST00000527027 STAT6P42226 847 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 SLC6A11P48066 632 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 HSF5Q4G112 596 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-210ENST00000527027 RHBDF2Q6PJF5 856 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 CBWD2Q8IUF1 395 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 CCDC65Q8IXS2 484 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 ALLCQ8N6M5 410 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 IL17RCQ8NAC3 791 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 TXNDC5Q8NBS9 432 aaKnown RBP17.18■□□□□ 0.34
PTPRU-210ENST00000527027 C8orf48Q96LL4 319 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 SNX25Q9H3E2 840 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 EVLQ9UI08 416 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-210ENST00000527027 CPQQ9Y646 472 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 FAM208BQ5VWN6 2430 aa17.18■□□□□ 0.34
PTPRU-210ENST00000527027 F8VP50 259 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 MAP3K13O43283 966 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 KAT7O95251 611 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms