RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PIM1P11309 404 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 PSG1P11464 419 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 FPR3P25089 353 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 PPIFP30405 207 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 FXR1P51114 621 aaKnown RBP eCLIP3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 NOGQ13253 232 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 ABCB5Q2M3G0 1257 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 ZNF628Q5EBL2 1059 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 DEPDC1Q5TB30 811 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 THEMIS2Q5TEJ8 643 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 MTHFD1LQ6UB35 978 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 PNMA8AQ86V59 439 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 DDX42Q86XP3 938 aaKnown RBP eCLIP3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 ZNF548Q8NEK5 533 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 PI4KBQ9UBF8 816 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 FEZ2Q9UHY8 353 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 MCM8Q9UJA3 840 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 TCF20Q9UGU0 1960 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 TMEM232C9JQI7 657 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 ERC2O15083 957 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 GCATO75600 419 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 TJP3O95049 919 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 TOMM40O96008 361 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 KRT10P13645 584 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 HDCP19113 662 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 HK3P52790 923 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 ADKP55263 362 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 RHDQ02161 417 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 EXOSC9Q06265 439 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 NPY5RQ15761 445 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 RNASE12Q5GAN4 147 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 SYDE2Q5VT97 1194 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 PIM3Q86V86 326 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 SLC15A3Q8IY34 581 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 THOC3Q96J01 351 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 MMS19Q96T76 1030 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 TMEM184CQ9NVA4 438 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 PNPOQ9NVS9 261 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 HEY2Q9UBP5 337 aa3.54□□□□□ -1.84
ECHDC1-219ENST00000526299 SHTN1A0MZ66 631 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 UNC5CO95185 931 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 PRKCBP05771 671 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 PDCP20941 246 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 ADORA2AP29274 412 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 CDKN2AP42771 156 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 E2F1Q01094 437 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 ODF1Q14990 250 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 LY6KQ17RY6 165 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 SDE2Q6IQ49 451 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 C18orf65Q6ZTR6 163 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 MIER2Q8N344 545 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 OSR1Q8TAX0 266 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 FYTTD1Q96QD9 318 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 SIGLEC11Q96RL6 698 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 CCDC8Q9H0W5 538 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 LMBRD1Q9NUN5 540 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 TRHDEQ9UKU6 1024 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 GABRQQ9UN88 632 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 ICKQ9UPZ9 632 aa3.53□□□□□ -1.84
ECHDC1-219ENST00000526299 ZMYM2Q9UBW7 1377 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 B4DGG1 531 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 H3BUI4 141 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 SLC16A6O15403 523 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 KRT86O43790 486 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 VNN1O95497 513 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 FTLP02792 175 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 MYCLP12524 364 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 TYRP14679 529 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 ME1P48163 572 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 PDE6CP51160 858 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 SRSF1Q07955 248 aaKnown RBP eCLIP3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 ITKQ08881 620 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 FHL3Q13643 280 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 KRT81Q14533 505 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 CCDC157Q569K6 752 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 ZNF549Q6P9A3 640 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 BCDIN3DQ7Z5W3 292 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 NECAB2Q7Z6G3 386 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 CAND1Q86VP6 1230 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 ZNF280BQ86YH2 543 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 OSCP1Q8WVF1 389 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 SOCS4Q8WXH5 440 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 MAP4K1Q92918 833 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 MOGAT1Q96PD6 335 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 FAM234AQ9H0X4 552 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 ASIC5Q9NY37 505 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 XPR1Q9UBH6 696 aa3.52□□□□□ -1.85
ECHDC1-219ENST00000526299 BTBD19C9JJ37 291 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 CES2O00748 559 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 CSF1RP07333 972 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 GRPP07492 148 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 CCND1P24385 295 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 MT3P25713 68 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 LRPAP1P30533 357 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 SATB1Q01826 763 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 CYP1B1Q16678 543 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 ZNF585BQ52M93 769 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 AWAT1Q58HT5 328 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 DPY19L3Q6ZPD9 716 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms