RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 MAPK8IP1Q9UQF2 711 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 SNX11Q9Y5W9 270 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 CYP46A1Q9Y6A2 500 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 SLC4A4Q9Y6R1 1079 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 PNMA6EA0A0J9YXQ4 647 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 VPS37CA5D8V6 355 aaPredicted RBP5.36□□□□□ -1.55
CD44-218ENST00000525469 MINDY4BA8MYZ0 360 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 HAS3O00219 553 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 NFIBO00712 420 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ENPP3O14638 875 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PLA2G6O60733 806 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PFKFB2O60825 505 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ARIH2O95376 493 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 F2P00734 622 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PROS1P07225 676 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 TSPY3P0CV98 308 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 TSPY8P0CW00 308 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 JUNBP17275 347 aaPredicted RBP5.36□□□□□ -1.55
CD44-218ENST00000525469 RANBP1P43487 201 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 NEK2P51955 445 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ZNF131P52739 623 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 TUBA4AP68366 448 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 MXRA7P84157 204 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ARHGAP1Q07960 439 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PWP1Q13610 501 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 INAQ16352 499 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 CFAP58Q5T655 872 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 GKAP1Q5VSY0 366 aaPredicted RBP5.36□□□□□ -1.55
CD44-218ENST00000525469 PLPP4Q5VZY2 271 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 XRRA1Q6P2D8 792 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 LRFN4Q6PJG9 635 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 AGMOQ6ZNB7 445 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 KCTD1Q719H9 257 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 HID1Q8IV36 788 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 CNGA4Q8IV77 575 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 VSTM4Q8IW00 320 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 CACNA2D3Q8IZS8 1091 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PLD6Q8N2A8 252 aaKnown RBP5.36□□□□□ -1.55
CD44-218ENST00000525469 FAM181AQ8N9Y4 354 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 VN1R2Q8NFZ6 395 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 RASSF8Q8NHQ8 419 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PPTC7Q8NI37 304 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ASB11Q8WXH4 323 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 CEP95Q96GE4 821 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ZMAT2Q96NC0 199 aaKnown RBP5.36□□□□□ -1.55
CD44-218ENST00000525469 SCLT1Q96NL6 688 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 GPR20Q99678 358 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 LLPHQ9BRT6 129 aaKnown RBP5.36□□□□□ -1.55
CD44-218ENST00000525469 FOXQ1Q9C009 403 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-218ENST00000525469 WNT10AQ9GZT5 417 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 NSRP1Q9H0G5 558 aaKnown RBP5.36□□□□□ -1.55
CD44-218ENST00000525469 ADAM7Q9H2U9 754 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 GOLPH3LQ9H4A5 285 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 KAT14Q9H8E8 782 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ANKZF1Q9H8Y5 726 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PCDH18Q9HCL0 1135 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 CD248Q9HCU0 757 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 JADE2Q9NQC1 790 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ENTPD7Q9NQZ7 604 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 MTMR4Q9NYA4 1195 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 NDUFA13Q9P0J0 144 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 RNF14Q9UBS8 474 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 PNMA2Q9UL42 364 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 RAB23Q9ULC3 237 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 DUSP12Q9UNI6 340 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 SIT1Q9Y3P8 196 aa5.36□□□□□ -1.55
CD44-218ENST00000525469 ANO9A1A5B4 782 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 VWA3AA6NCI4 1184 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 RBAK-RBAKDNI3L0D1 243 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 SLC30A4O14863 429 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 LAMTOR5O43504 91 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 KDM1AO60341 852 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 LEFTY1O75610 366 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 RNF8O76064 485 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 FGF18O76093 207 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 ATP6V1G2O95670 118 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 BPNT1O95861 308 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 SYF2O95926 243 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 EOMESO95936 686 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 SERPINC1P01008 464 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 MYL1P05976 194 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 DCNP07585 359 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 TRIM21P19474 475 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 ITIH2P19823 946 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 EDNRBP24530 442 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CASP14P31944 242 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 NTF4P34130 210 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CA8P35219 290 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 SERPINB8P50452 374 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CLCN2P51788 898 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CLCN7P51798 805 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 OXCT1P55809 520 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 UBASH3AP57075 661 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 RPS6P62753 249 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 MYL5Q02045 173 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 KIF5AQ12840 1032 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 BIRC3Q13489 604 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 BYSLQ13895 437 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms