RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 F8VP50 259 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 H7C4K7 107 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 CCL16O15467 120 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 MOSPD3O75425 235 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 TPM2P07951 284 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 ATF2P15336 505 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 CD19P15391 556 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 TBXAS1P24557 533 aaPredicted RBP6.88□□□□□ -1.31
CD44-214ENST00000525211 CCR2P41597 374 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 RGS7P49802 495 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 NDUFV1P49821 464 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 MAP3K7CLP57077 242 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 PDE4CQ08493 712 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 CETN1Q12798 172 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 COL19A1Q14993 1142 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 CTC1Q2NKJ3 1217 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 C2CD6Q53TS8 623 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 SPECC1LQ69YQ0 1117 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 BHLHA9Q7RTU4 235 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 PHLDB2Q86SQ0 1253 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 UNC93AQ86WB7 457 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 GPR65Q8IYL9 337 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 THEM5Q8N1Q8 247 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 KREMEN2Q8NCW0 462 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 SCAMP5Q8TAC9 235 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 SLC7A14Q8TBB6 771 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 EPS8L1Q8TE68 723 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 CLEC4CQ8WTT0 213 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 ZNF606Q8WXB4 792 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 JAKMIP2Q96AA8 810 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 MRFAP1L1Q96HT8 127 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 PIWIL1Q96J94 861 aaKnown RBP6.88□□□□□ -1.31
CD44-214ENST00000525211 HNRNPABQ99729 332 aaKnown RBP6.88□□□□□ -1.31
CD44-214ENST00000525211 LRRC3Q9BY71 257 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 S1PR5Q9H228 398 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 CYP4F11Q9HBI6 524 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 NGRNQ9NPE2 291 aaKnown RBP6.88□□□□□ -1.31
CD44-214ENST00000525211 MAN1C1Q9NR34 630 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 ARHGAP20Q9P2F6 1191 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 AFF4Q9UHB7 1163 aaKnown RBP6.88□□□□□ -1.31
CD44-214ENST00000525211 CHORDC1Q9UHD1 332 aaPredicted RBP6.88□□□□□ -1.31
CD44-214ENST00000525211 TSPAN16Q9UKR8 245 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 DSEQ9UL01 958 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.88□□□□□ -1.31
CD44-214ENST00000525211 PCDHB3Q9Y5E6 796 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
CD44-214ENST00000525211 C5orf42Q9H799 3197 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 A0A0U1RQJ8 604 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 A0A1W2PQJ5 194 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 H3BQ06 376 aaPredicted RBP6.87□□□□□ -1.31
CD44-214ENST00000525211 DDX3XO00571 662 aaKnown RBP eCLIP6.87□□□□□ -1.31
CD44-214ENST00000525211 TNFRSF10BO14763 440 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 THAP12O43422 761 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 MFAP3LO75121 409 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 TADA3O75528 432 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 GJB6O95452 261 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 GLUD1P00367 558 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 PAEPP09466 180 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 VDRP11473 427 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 P4HA1P13674 534 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 FOSL2P15408 326 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 CYP11B1P15538 503 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 HMGA1P17096 107 aaKnown RBP6.87□□□□□ -1.31
CD44-214ENST00000525211 GJA1P17302 382 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 TRIM21P19474 475 aaKnown RBP6.87□□□□□ -1.31
CD44-214ENST00000525211 PAX3P23760 479 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 PCSK1P29120 753 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 GNA15P30679 374 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 KRT9P35527 623 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 STAT1P42224 750 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 GPD2P43304 727 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 TWF1Q12792 350 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 MTF1Q14872 753 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 CNGA2Q16280 664 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 MGAT5BQ3V5L5 792 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 FIGNQ5HY92 759 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 RARS2Q5T160 578 aaKnown RBP6.87□□□□□ -1.31
CD44-214ENST00000525211 ARHGAP17Q68EM7 881 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 PMF1Q6P1K2 205 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 LCLAT1Q6UWP7 414 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 TMC5Q6UXY8 1006 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 THSD4Q6ZMP0 1018 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 CLEC20AQ6ZU45 233 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 TMEM150AQ86TG1 271 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 TMC8Q8IU68 726 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 SPATA2LQ8IUW3 424 aaPredicted RBP6.87□□□□□ -1.31
CD44-214ENST00000525211 TMEM139Q8IV31 216 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 SCN4BQ8IWT1 228 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 HOMEZQ8IX15 550 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 EFHBQ8N7U6 833 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 CCDC150Q8NCX0 1101 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 ZNF461Q8TAF7 563 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 SPATA18Q8TC71 538 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
CD44-214ENST00000525211 SECISBP2LQ93073 1101 aaKnown RBP6.87□□□□□ -1.31
CD44-214ENST00000525211 TCEAL4Q96EI5 215 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms