RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 YAF2Q8IY57 180 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 ZBTB44Q8NCP5 570 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 GPT2Q8TD30 523 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 B3GNT5Q9BYG0 378 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 SEMA4AQ9H3S1 761 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 FBRSL1Q9HCM7 1045 aaKnown RBP13.38□□□□□ -0.27
SMCO4-202ENST00000525141 PRMT8Q9NR22 394 aaPredicted RBP13.38□□□□□ -0.27
SMCO4-202ENST00000525141 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
SMCO4-202ENST00000525141 TDP1Q9NUW8 608 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 FRMD4BQ9Y2L6 1034 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 PTPRDP23468 1912 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 ATG2BQ96BY7 2078 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 C2orf78A6NCI8 922 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 PPP1R3GB7ZBB8 358 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 CLDN5O00501 218 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 PSMA7O14818 248 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 LILRB5O75023 590 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 NR2F2P24468 414 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 ATICP31939 592 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 CTHP32929 405 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 KPNA1P52294 538 aaPredicted RBP13.37□□□□□ -0.27
SMCO4-202ENST00000525141 LRRC63Q05C16 580 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 ADAM9Q13443 819 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 MDH1BQ5I0G3 518 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 TRIM68Q6AZZ1 485 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 DCLK2Q8N568 766 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 OR6B3Q8NGW1 331 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 CSGALNACT1Q8TDX6 532 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 RNF38Q9H0F5 515 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 LINC00597Q9H2U6 94 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 C8orf33Q9H7E9 229 aaPredicted RBP13.37□□□□□ -0.27
SMCO4-202ENST00000525141 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
SMCO4-202ENST00000525141 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
SMCO4-202ENST00000525141 FRYLO94915 3013 aa13.37□□□□□ -0.27
SMCO4-202ENST00000525141 BIN1O00499 593 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 LMNAP02545 664 aaKnown RBP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 DDX6P26196 483 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 PSMC2P35998 433 aaKnown RBP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 GRIK1P39086 918 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 RAP1GAPP47736 663 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 FKBP3Q00688 224 aaKnown RBP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 CYP27A1Q02318 531 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 ENPEPQ07075 957 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 TRPC3Q13507 836 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 PON2Q15165 354 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 ZACNQ401N2 412 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 ANKRD40Q6AI12 368 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 VSTM1Q6UX27 236 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 C4orf50Q6ZRC1 276 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 SV2AQ7L0J3 742 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 RALGPS2Q86X27 583 aaPredicted RBP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 ARL14EPQ8N8R7 260 aaPredicted RBP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 MRPS31Q92665 395 aaKnown RBP13.36□□□□□ -0.27
SMCO4-202ENST00000525141 C8orf48Q96LL4 319 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 TSG101Q99816 390 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 SNX25Q9H3E2 840 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 SMYD3Q9H7B4 428 aa13.36□□□□□ -0.27
SMCO4-202ENST00000525141 A8MXQ7 604 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 F8VP50 259 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 IKBKBO14920 756 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 CETN3O15182 167 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 PHACTR2O75167 634 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 AKAP3O75969 853 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 ARSAP15289 507 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 AVPR1AP37288 418 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 GALK1P51570 392 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 AP3M2P53677 418 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 SATB1Q01826 763 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 DMWDQ09019 674 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 RUNX3Q13761 415 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 NCOA4Q13772 614 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 CCINQ13939 588 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 ITPRIPL2Q3MIP1 535 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 CEP135Q66GS9 1140 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 NAIF1Q69YI7 327 aaPredicted RBP13.35□□□□□ -0.27
SMCO4-202ENST00000525141 Q6ZS52 159 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 ZC3H3Q8IXZ2 948 aaKnown RBP13.35□□□□□ -0.27
SMCO4-202ENST00000525141 MLKLQ8NB16 471 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
SMCO4-202ENST00000525141 GCNAQ96QF7 691 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 TTLL2Q9BWV7 592 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 ZNF518BQ9C0D4 1074 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 THG1LQ9NWX6 298 aaKnown RBP13.35□□□□□ -0.27
SMCO4-202ENST00000525141 ZSCAN32Q9NX65 697 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 ZMYM5Q9UJ78 669 aa13.35□□□□□ -0.27
SMCO4-202ENST00000525141 BICDL2A1A5D9 508 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 ZNF840PA6NDX5 716 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 K7ESF4 209 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 HDCP19113 662 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 PMS1P54277 932 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms