RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 GJA4P35212 333 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 TNNC1P63316 161 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 FOXK2Q01167 660 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 SPEM2Q0P670 501 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 EML3Q32P44 896 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 WDR72Q3MJ13 1102 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 TDRD10Q5VZ19 366 aaKnown RBP12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 SCARA5Q6ZMJ2 495 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 HS2ST1Q7LGA3 356 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 DGLUCYQ7Z3D6 616 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 LONP2Q86WA8 852 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 OSCP1Q8WVF1 389 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 ZNF518BQ9C0D4 1074 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 LINC00597Q9H2U6 94 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 SNX25Q9H3E2 840 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 ECT2Q9H8V3 914 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 DUS2Q9NX74 493 aaKnown RBP12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 GMEB2Q9UKD1 530 aa12.61□□□□□ -0.39
CLNS1A-202ENST00000525064 EXOC3O60645 756 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 STAU1O95793 577 aaKnown RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 SLFN14P0C7P3 912 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 PFKFB1P16118 471 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 GNL1P36915 607 aaPredicted RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 IFNAR2P48551 515 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 GALK1P51570 392 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 CDH8P55286 799 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 DLG4P78352 724 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 GRSF1Q12849 480 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 SIM2Q14190 667 aaPredicted RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 PUM1Q14671 1186 aaKnown RBP eCLIP12.6□□□□□ -0.392e-8■■□□□ 12.5
CLNS1A-202ENST00000525064 KCNB1Q14721 858 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 PDGFRLQ15198 375 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 LAIR1Q6GTX8 287 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 DENND5BQ6ZUT9 1274 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 WDR5BQ86VZ2 330 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 CEP57L1Q8IYX8 460 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 KCTD10Q9H3F6 313 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 DMAC2Q9NW81 257 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 RAB23Q9ULC3 237 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 SPTBN2O15020 2390 aa12.6□□□□□ -0.39
CLNS1A-202ENST00000525064 A8MXQ7 604 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 SCAMP3O14828 347 aaKnown RBP12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 TRIM66O15016 1216 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 C4BPAP04003 597 aaKnown RBP12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 TCF3P15923 654 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 HDCP19113 662 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 ANXA13P27216 316 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 TRPC3Q13507 836 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 MAPRE1Q15691 268 aaKnown RBP12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 GAB4Q2WGN9 574 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 CPA6Q8N4T0 437 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 FSIP1Q8NA03 581 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 PARD3BQ8TEW8 1205 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 P2RY13Q9BPV8 354 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 RNF38Q9H0F5 515 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 EXOC1Q9NV70 894 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 HMGXB4Q9UGU5 601 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 CFAP45Q9UL16 551 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 HPSEQ9Y251 543 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 THADAQ6YHU6 1953 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 LAMA1P25391 3075 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
CLNS1A-202ENST00000525064 ZNF840PA6NDX5 716 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 LEFTY2O00292 366 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 PHACTR2O75167 634 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 OLFM2O95897 454 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 RETP07949 1114 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 HOXA6P31267 233 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 ATXN1P54253 815 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 NOP14P78316 857 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 TAF10Q12962 218 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 ORC1Q13415 861 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 BIRC3Q13489 604 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 ZNF699Q32M78 642 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 C1orf220Q5T0J3 134 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 SPOPLQ6IQ16 392 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 FAM35AQ86V20 835 aa12.58□□□□□ -0.4
CLNS1A-202ENST00000525064 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms